Factsheet for Bra024148.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011098.1-P	Field mustard	cytosol	99.25	99.25
CDY30218	Canola	cytosol	99.25	99.25
AT4G29340.1	Thale cress	cytosol	95.52	95.52
Bra010331.1-P	Field mustard	cytosol	94.03	94.03
Bra036705.1-P	Field mustard	cytosol	91.79	91.79
Bra031101.1-P	Field mustard	cytosol	91.04	91.04
Bra039019.1-P	Field mustard	cytosol	91.04	91.04
VIT_11s0016g02940.t01	Wine grape	cytosol	82.84	83.46
KRH60195	Soybean	cytosol	82.84	83.46
KRH41476	Soybean	cytosol	82.84	83.46
KRH49003	Soybean	cytosol	80.6	81.2
Solyc12g044630.1.1	Tomato	cytosol	79.85	80.45
PGSC0003DMT400069000	Potato	cytosol	79.85	80.45
KRH74207	Soybean	cytosol	79.85	80.45
Bra002804.1-P	Field mustard	cytosol	78.36	80.15
Bra036707.1-P	Field mustard	cytosol	78.36	80.15
Bra039018.1-P	Field mustard	cytosol	77.61	79.39
Bra031097.1-P	Field mustard	cytosol	77.61	79.39
PGSC0003DMT400042529	Potato	cytosol	77.61	79.39
GSMUA_Achr5P09300_001	Banana	cytosol	76.87	78.63
Solyc06g066410.2.1	Tomato	cytosol, unclear	76.87	78.63
GSMUA_Achr1P11580_001	Banana	cytosol	76.12	77.86
GSMUA_Achr9P00090_001	Banana	cytosol	76.12	77.86
GSMUA_Achr4P01030_001	Banana	cytosol	75.37	77.1
Bra011099.1-P	Field mustard	cytosol	75.37	77.1
GSMUA_Achr6P22530_001	Banana	cytosol	74.63	76.34
GSMUA_Achr1P04950_001	Banana	cytosol	74.63	76.34
Bra006865.1-P	Field mustard	cytosol	76.12	76.12
PGSC0003DMT400088098	Potato	cytosol	69.4	70.45
Solyc11g071210.1.1	Tomato	cytosol	14.18	59.38
Bra014545.1-P	Field mustard	cytosol	42.54	27.8

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	EnsemblPlantsGene:Bra024148	EnsemblPlants:Bra024148.1	EnsemblPlants:Bra024148.1-P	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	UniProt:M4E5U4	PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392
PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392
SUPFAM:SSF55770	UniParc:UPI0002540CC2	SEG:seg	:	:	:

Description

AT4G29340 (E=6e-064) PRF4 | PRF4 (PROFILIN 4); actin binding

Coordinates

chrA03:+:27323074..27323814

Molecular Weight (calculated)

14528.4 Da

IEP (calculated)

5.113

GRAVY (calculated)

-0.163

Length

134 amino acids

Sequence
(BLAST)

001: MSWQTYVDEH LMCDVRDGQG HHLTAAAIVG HDGSVWAQSA NFPQFKAQEF TGIMKDFDEP GHLAPTGLFL AGAKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLL EQDL

Best Arabidopsis Sequence Match ( AT4G29340.1 )
(BLAST)

001: MSWQTYVDEH LMCDVGDGQG HHLTAAAIVG HDGSVWAQSA NFPQFKGQEF SDIMKDFDEP GHLAPTGLFM AGAKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLL EQGL

Arabidopsis Description

PRO3Profilin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q38904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.