Factsheet for GSMUA_Achr6P22530_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P00090_001	Banana	cytosol	96.18	96.18
GSMUA_Achr4P01030_001	Banana	cytosol	95.42	95.42
GSMUA_Achr1P11580_001	Banana	cytosol	94.66	94.66
GSMUA_Achr5P09300_001	Banana	cytosol	87.79	87.79
GSMUA_Achr1P04950_001	Banana	cytosol	85.5	85.5
GSMUA_Achr8P20180_001	Banana	cytosol	83.21	83.21
GSMUA_Achr2P19390_001	Banana	cytosol	82.44	82.44
VIT_11s0016g02940.t01	Wine grape	cytosol	83.21	81.95
VIT_09s0002g03250.t01	Wine grape	cytosol, extracellular	81.68	81.68
GSMUA_Achr7P13660_001	Banana	cytosol	80.15	80.15
GSMUA_Achr10P...	Banana	cytosol	80.15	80.15
GSMUA_Achr3P17580_001	Banana	cytosol	79.39	79.39
KRH49003	Soybean	cytosol	80.15	78.95
GSMUA_Achr6P14890_001	Banana	cytosol	78.63	78.63
KRH74207	Soybean	cytosol	79.39	78.2
KRH60195	Soybean	cytosol	78.63	77.44
PGSC0003DMT400069000	Potato	cytosol	78.63	77.44
Solyc06g066410.2.1	Tomato	cytosol, unclear	77.1	77.1
KRH41476	Soybean	cytosol	77.86	76.69
Solyc12g044630.1.1	Tomato	cytosol	77.86	76.69
PGSC0003DMT400042529	Potato	cytosol	76.34	76.34
GSMUA_Achr5P06510_001	Banana	cytosol	75.57	75.57
CDY48612	Canola	cytosol	76.34	74.63
Bra024148.1-P	Field mustard	cytosol	76.34	74.63
Bra011098.1-P	Field mustard	cytosol	76.34	74.63
CDY47769	Canola	cytosol	76.34	74.63
CDY30218	Canola	cytosol	76.34	74.63
CDY06821	Canola	cytosol	76.34	74.63
CDX81945	Canola	cytosol	76.34	74.63
AT4G29340.1	Thale cress	cytosol	75.57	73.88
PGSC0003DMT400088098	Potato	cytosol	74.05	73.48
KRH09953	Soybean	cytosol	73.28	73.28
AT2G19770.1	Thale cress	cytosol	74.81	73.13
Bra010331.1-P	Field mustard	cytosol	74.81	73.13
Bra031101.1-P	Field mustard	cytosol	74.81	73.13
Bra039019.1-P	Field mustard	cytosol	74.81	73.13
CDY62034	Canola	cytosol	74.81	73.13
CDY35887	Canola	cytosol	74.81	73.13
CDY14215	Canola	cytosol	74.81	73.13
CDY03342	Canola	cytosol	74.81	73.13
Bra036705.1-P	Field mustard	cytosol	74.05	72.39
CDY48726	Canola	cytosol	61.83	70.43
Solyc11g071210.1.1	Tomato	cytosol	16.79	68.75
CDX82721	Canola	cytosol	52.67	49.64

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	EnsemblPlantsGene:GSMUA_Achr6G22530_001	EnsemblPlants:GSMUA_Achr6P22530_001
EnsemblPlants:GSMUA_Achr6T22530_001	UniProt:M0T9A1	PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392
PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392
SUPFAM:SSF55770	UniParc:UPI000296C961	:	:	:	:

Description

Profilin-1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G22530_001]

Coordinates

chr6:-:20570332..20572913

Molecular Weight (calculated)

14252.1 Da

IEP (calculated)

4.467

GRAVY (calculated)

-0.111

Length

131 amino acids

Sequence
(BLAST)

001: MSWQTYVDDH LMCEIEGRHL TASAIVGQDG SVWAQSASFP QFKPEEVTNI INDFNEPGTL APIGLFLGST KYMVIQGEPG AVIRGKKGSG GITVKKTNQA
101: LIFGIYDEPM TPGQCNMVVE RLGDYLIDQG L

Best Arabidopsis Sequence Match ( AT2G19760.1 )
(BLAST)

001: MSWQSYVDDH LMCDVEGNHL TAAAILGQDG SVWAQSAKFP QLKPQEIDGI KKDFEEPGFL APTGLFLGGE KYMVIQGEQG AVIRGKKGPG GVTIKKTNQA
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L

Arabidopsis Description

PRO1Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42449]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.