Factsheet for GSMUA_Achr5P09300_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P00090_001	Banana	cytosol	89.31	89.31
GSMUA_Achr1P11580_001	Banana	cytosol	88.55	88.55
GSMUA_Achr6P22530_001	Banana	cytosol	87.79	87.79
GSMUA_Achr4P01030_001	Banana	cytosol	87.02	87.02
GSMUA_Achr1P04950_001	Banana	cytosol	87.02	87.02
VIT_09s0002g03250.t01	Wine grape	cytosol, extracellular	81.68	81.68
VIT_11s0016g02940.t01	Wine grape	cytosol	82.44	81.2
GSMUA_Achr8P20180_001	Banana	cytosol	80.92	80.92
GSMUA_Achr2P19390_001	Banana	cytosol	80.15	80.15
GSMUA_Achr7P13660_001	Banana	cytosol	79.39	79.39
Solyc12g044630.1.1	Tomato	cytosol	79.39	78.2
KRH60195	Soybean	cytosol	79.39	78.2
GSMUA_Achr3P17580_001	Banana	cytosol	77.86	77.86
CDX81945	Canola	cytosol	79.39	77.61
PGSC0003DMT400069000	Potato	cytosol	78.63	77.44
KRH74207	Soybean	cytosol	78.63	77.44
Solyc06g066410.2.1	Tomato	cytosol, unclear	77.1	77.1
PGSC0003DMT400042529	Potato	cytosol	77.1	77.1
GSMUA_Achr6P14890_001	Banana	cytosol	77.1	77.1
AT4G29340.1	Thale cress	cytosol	78.63	76.87
Bra011098.1-P	Field mustard	cytosol	78.63	76.87
Bra024148.1-P	Field mustard	cytosol	78.63	76.87
CDY03342	Canola	cytosol	78.63	76.87
CDY06821	Canola	cytosol	78.63	76.87
CDY30218	Canola	cytosol	78.63	76.87
CDY48612	Canola	cytosol	78.63	76.87
CDY47769	Canola	cytosol	78.63	76.87
KRH41476	Soybean	cytosol	77.86	76.69
KRH49003	Soybean	cytosol	77.86	76.69
GSMUA_Achr10P...	Banana	cytosol	76.34	76.34
AT2G19770.1	Thale cress	cytosol	77.86	76.12
Bra036705.1-P	Field mustard	cytosol	77.86	76.12
Bra039019.1-P	Field mustard	cytosol	77.1	75.37
CDY35887	Canola	cytosol	77.1	75.37
Bra031101.1-P	Field mustard	cytosol	77.1	75.37
CDY62034	Canola	cytosol	76.34	74.63
CDY14215	Canola	cytosol	76.34	74.63
Bra010331.1-P	Field mustard	cytosol	76.34	74.63
GSMUA_Achr5P06510_001	Banana	cytosol	74.05	74.05
CDY48726	Canola	cytosol	64.12	73.04
KRH09953	Soybean	cytosol	72.52	72.52
PGSC0003DMT400088098	Potato	cytosol	70.99	70.45
Solyc11g071210.1.1	Tomato	cytosol	16.03	65.62
CDX82721	Canola	cytosol	55.73	52.52

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	EnsemblPlantsGene:GSMUA_Achr5G09300_001	EnsemblPlants:GSMUA_Achr5P09300_001
EnsemblPlants:GSMUA_Achr5T09300_001	UniProt:M0SX09	PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392
PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392
SUPFAM:SSF55770	UniParc:UPI000296E5A9	SEG:seg	:	:	:

Description

Profilin-A [Source:GMGC_GENE;Acc:GSMUA_Achr5G09300_001]

Coordinates

chr5:+:6736676..6738518

Molecular Weight (calculated)

14233.2 Da

IEP (calculated)

4.833

GRAVY (calculated)

-0.095

Length

131 amino acids

Sequence
(BLAST)

001: MSWQTYVDEH LMCEIEGHHL TAAAIIGHDG SVWAQSASFP KFKPEEFTNI MNDFNEPGTL APVGLFIGST KYMVIQGEPG AVIRGKKGSG GITIKKTGQA
101: LIVGLYDEPM TPGQCNMVVE RLGDYLLDQG M

Best Arabidopsis Sequence Match ( AT4G29340.1 )
(BLAST)

001: MSWQTYVDEH LMCDVGDGQG HHLTAAAIVG HDGSVWAQSA NFPQFKGQEF SDIMKDFDEP GHLAPTGLFM AGAKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLL EQGL

Arabidopsis Description

PRO3Profilin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q38904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.