CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41476	Soybean	cytosol	93.98	93.98
KRH49003	Soybean	cytosol	89.47	89.47
KRH74207	Soybean	cytosol	88.72	88.72
CDX81945	Canola	cytosol	86.47	85.82
VIT_11s0016g02940.t01	Wine grape	cytosol	85.71	85.71
AT2G19770.1	Thale cress	cytosol	85.71	85.07
CDY03342	Canola	cytosol	84.96	84.33
Solyc12g044630.1.1	Tomato	cytosol	84.21	84.21
Bra031101.1-P	Field mustard	cytosol	84.21	83.58
Bra036705.1-P	Field mustard	cytosol	84.21	83.58
Bra039019.1-P	Field mustard	cytosol	84.21	83.58
CDY35887	Canola	cytosol	84.21	83.58
AT4G29340.1	Thale cress	cytosol	83.46	82.84
CDY48612	Canola	cytosol	83.46	82.84
CDY47769	Canola	cytosol	83.46	82.84
CDY30218	Canola	cytosol	83.46	82.84
Bra011098.1-P	Field mustard	cytosol	83.46	82.84
Bra024148.1-P	Field mustard	cytosol	83.46	82.84
CDY06821	Canola	cytosol	83.46	82.84
PGSC0003DMT400069000	Potato	cytosol	82.71	82.71
CDY62034	Canola	cytosol	82.71	82.09
CDY14215	Canola	cytosol	81.95	81.34
Bra010331.1-P	Field mustard	cytosol	81.95	81.34
GSMUA_Achr4P01030_001	Banana	cytosol	78.95	80.15
PGSC0003DMT400042529	Potato	cytosol	78.95	80.15
GSMUA_Achr1P11580_001	Banana	cytosol	78.95	80.15
CDY48726	Canola	cytosol	69.17	80.0
GSMUA_Achr9P00090_001	Banana	cytosol	78.2	79.39
KRH09953	Soybean	cytosol	78.2	79.39
GSMUA_Achr5P09300_001	Banana	cytosol	78.2	79.39
KRH60197	Soybean	cytosol	78.2	79.39
Solyc06g066410.2.1	Tomato	cytosol, unclear	78.2	79.39
GSMUA_Achr6P22530_001	Banana	cytosol	77.44	78.63
KRH41477	Soybean	nucleus	76.69	77.86
KRH41478	Soybean	cytosol	76.69	77.86
GSMUA_Achr1P04950_001	Banana	cytosol	76.69	77.86
PGSC0003DMT400088098	Potato	cytosol	70.68	71.21
Solyc11g071210.1.1	Tomato	cytosol	15.79	65.62
CDX82721	Canola	cytosol	59.4	56.83

Protein Annotations

EntrezGene:100784770	MapMan:20.2.2.3	Gene3D:3.30.450.30	EMBL:ACUP02003352	EnsemblPlantsGene:GLYMA_05G225600	GO:GO:0003674
GO:GO:0003779	GO:GO:0003785	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005938	GO:GO:0008150	GO:GO:0009987
GO:GO:0015629	GO:GO:0016043	GO:GO:0042989	UniProt:I1K602	EnsemblPlants:KRH60195	ProteinID:KRH60195
ProteinID:KRH60195.1	PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392	PRINTS:PR01640
ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392	SUPFAM:SSF55770
UniParc:UPI00023393F2	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:40427955..40429788

Molecular Weight (calculated)

14336.1 Da

IEP (calculated)

5.080

GRAVY (calculated)

-0.160

Length

133 amino acids

Sequence
(BLAST)

001: MSWQTYVDDH LMCDIDGTGH HLTAAAIIGH DGSVWAQSSS FPQIRPQEIT DIMKDFDEPG HLAPTGLHLA GTKYMVIQGE SGAVIRGKKG PGGITIKKTG
101: QALVFGVYEE PVTPGQCNMV VERLGDYLID QGL

Best Arabidopsis Sequence Match ( AT2G19770.1 )
(BLAST)

001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL

Arabidopsis Description

PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.