CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74207	Soybean	cytosol	97.74	97.74
KRH41476	Soybean	cytosol	91.73	91.73
KRH60195	Soybean	cytosol	89.47	89.47
VIT_11s0016g02940.t01	Wine grape	cytosol	85.71	85.71
Solyc12g044630.1.1	Tomato	cytosol	84.21	84.21
PGSC0003DMT400069000	Potato	cytosol	83.46	83.46
Bra036705.1-P	Field mustard	cytosol	82.71	82.09
GSMUA_Achr1P11580_001	Banana	cytosol	80.45	81.68
CDY03342	Canola	cytosol	81.95	81.34
PGSC0003DMT400042529	Potato	cytosol	79.7	80.92
Bra024148.1-P	Field mustard	cytosol	81.2	80.6
Bra011098.1-P	Field mustard	cytosol	81.2	80.6
CDY06821	Canola	cytosol	81.2	80.6
CDY30218	Canola	cytosol	81.2	80.6
CDY47769	Canola	cytosol	81.2	80.6
CDY48612	Canola	cytosol	81.2	80.6
GSMUA_Achr6P22530_001	Banana	cytosol	78.95	80.15
GSMUA_Achr4P01030_001	Banana	cytosol	78.95	80.15
AT4G29340.1	Thale cress	cytosol	80.45	79.85
CDY62034	Canola	cytosol	80.45	79.85
CDY35887	Canola	cytosol	80.45	79.85
Bra039019.1-P	Field mustard	cytosol	80.45	79.85
CDX81945	Canola	cytosol	80.45	79.85
Solyc06g066410.2.1	Tomato	cytosol, unclear	78.2	79.39
GSMUA_Achr9P00090_001	Banana	cytosol	78.2	79.39
KRH09953	Soybean	cytosol	78.2	79.39
AT2G19770.1	Thale cress	cytosol	79.7	79.1
Bra010331.1-P	Field mustard	cytosol	79.7	79.1
CDY14215	Canola	cytosol	79.7	79.1
KRH60197	Soybean	cytosol	77.44	78.63
Bra031101.1-P	Field mustard	cytosol	78.95	78.36
CDY48726	Canola	cytosol	67.67	78.26
GSMUA_Achr5P09300_001	Banana	cytosol	76.69	77.86
KRH41477	Soybean	nucleus	75.94	77.1
KRH41478	Soybean	cytosol	75.19	76.34
GSMUA_Achr1P04950_001	Banana	cytosol	74.44	75.57
PGSC0003DMT400088098	Potato	cytosol	69.92	70.45
Solyc11g071210.1.1	Tomato	cytosol	15.79	65.62
CDX82721	Canola	cytosol	56.39	53.96

Protein Annotations

EntrezGene:100789770	MapMan:20.2.2.3	Gene3D:3.30.450.30	EMBL:ACUP02004327	EnsemblPlantsGene:GLYMA_07G125700	GO:GO:0003674
GO:GO:0003779	GO:GO:0003785	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005938	GO:GO:0008150	GO:GO:0009987
GO:GO:0015629	GO:GO:0016043	GO:GO:0042989	UniProt:I1KJR5	EnsemblPlants:KRH49003	ProteinID:KRH49003
ProteinID:KRH49003.1	PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392	PRINTS:PR01640
ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392	SUPFAM:SSF55770
UniParc:UPI00023C83D8	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:15014211..15016634

Molecular Weight (calculated)

14234.9 Da

IEP (calculated)

4.805

GRAVY (calculated)

-0.189

Length

133 amino acids

Sequence
(BLAST)

001: MSWQTYVDDH LMCDIDGTGH HLSSSAIIGQ DGSVWAQSSS FPQIKSDEIN GIMKDFDEPG HLAPTGLHLA GTKYMVIQGE PGAVIRGKKG SGGITIKKTG
101: QALVFGIYDE PVTPGQCNMV VERLGDYLVD QGL

Best Arabidopsis Sequence Match ( AT4G29340.1 )
(BLAST)

001: MSWQTYVDEH LMCDVGDGQG HHLTAAAIVG HDGSVWAQSA NFPQFKGQEF SDIMKDFDEP GHLAPTGLFM AGAKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLL EQGL

Arabidopsis Description

PRO3Profilin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q38904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.