Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14215 | Canola | cytosol | 98.51 | 98.51 |
| CDY48612 | Canola | cytosol | 95.52 | 95.52 |
| CDY47769 | Canola | cytosol | 95.52 | 95.52 |
| CDY06821 | Canola | cytosol | 95.52 | 95.52 |
| CDY30218 | Canola | cytosol | 95.52 | 95.52 |
| AT4G29340.1 | Thale cress | cytosol | 94.78 | 94.78 |
| CDX81945 | Canola | cytosol | 93.28 | 93.28 |
| CDY03342 | Canola | cytosol | 91.79 | 91.79 |
| CDY35887 | Canola | cytosol | 91.04 | 91.04 |
| CDY48726 | Canola | cytosol | 72.39 | 84.35 |
| KRH41476 | Soybean | cytosol | 82.84 | 83.46 |
| KRH60195 | Soybean | cytosol | 82.09 | 82.71 |
| PGSC0003DMT400042529 | Potato | cytosol | 79.1 | 80.92 |
| VIT_11s0016g02940.t01 | Wine grape | cytosol | 79.85 | 80.45 |
| KRH49003 | Soybean | cytosol | 79.85 | 80.45 |
| KRH74207 | Soybean | cytosol | 79.1 | 79.7 |
| CDY32870 | Canola | cytosol | 77.61 | 79.39 |
| CDY48724 | Canola | cytosol | 77.61 | 79.39 |
| CDY03344 | Canola | cytosol | 77.61 | 79.39 |
| Solyc12g044630.1.1 | Tomato | cytosol | 78.36 | 78.95 |
| PGSC0003DMT400069000 | Potato | cytosol | 78.36 | 78.95 |
| CDX81944 | Canola | cytosol | 76.87 | 78.63 |
| CDX82720 | Canola | cytosol | 76.87 | 78.63 |
| CDY21648 | Canola | cytosol | 76.87 | 78.63 |
| CDY64971 | Canola | cytosol | 76.87 | 78.63 |
| Solyc06g066410.2.1 | Tomato | cytosol, unclear | 76.87 | 78.63 |
| CDY11912 | Canola | cytosol | 76.87 | 78.03 |
| CDX88579 | Canola | cytosol | 76.87 | 78.03 |
| CDY35886 | Canola | cytosol | 76.12 | 77.86 |
| GSMUA_Achr1P11580_001 | Banana | cytosol | 75.37 | 77.1 |
| CDY68825 | Canola | cytosol | 74.63 | 76.34 |
| CDY06819 | Canola | cytosol | 74.63 | 76.34 |
| GSMUA_Achr5P09300_001 | Banana | cytosol | 74.63 | 76.34 |
| GSMUA_Achr9P00090_001 | Banana | cytosol | 74.63 | 76.34 |
| GSMUA_Achr4P01030_001 | Banana | cytosol | 73.88 | 75.57 |
| GSMUA_Achr1P04950_001 | Banana | cytosol | 73.88 | 75.57 |
| GSMUA_Achr6P22530_001 | Banana | cytosol | 73.13 | 74.81 |
| PGSC0003DMT400088098 | Potato | cytosol | 68.66 | 69.7 |
| CDX82721 | Canola | cytosol | 63.43 | 61.15 |
| Solyc11g071210.1.1 | Tomato | cytosol | 14.18 | 59.38 |
| CDY03443 | Canola | cytosol | 29.1 | 58.21 |
| CDY40192 | Canola | cytosol, plastid | 23.88 | 41.03 |
| CDX99366 | Canola | cytosol, mitochondrion, vacuole | 37.31 | 40.32 |
| CDY13363 | Canola | peroxisome, plasma membrane, plastid | 44.78 | 17.39 |
Protein Annotations
| MapMan:20.2.2.3 | Gene3D:3.30.450.30 | GO:A0A078J971 | UniProt:A0A078J971 | EnsemblPlants:CDY62034 | ProteinID:CDY62034 |
| ProteinID:CDY62034.1 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | EnsemblPlantsGene:GSBRNA2T00035860001 | PFAM:PF00235 | InterPro:PFN |
| InterPro:PFN_sf | PRINTS:PR00392 | PRINTS:PR01640 | ScanProsite:PS00414 | PANTHER:PTHR11604 | PANTHER:PTHR11604:SF7 |
| InterPro:Profilin_CS | SMART:SM00392 | SUPFAM:SSF55770 | UniParc:UPI0004EB680A | SEG:seg | : |
Description
BnaC03g77670DProfilin [Source:UniProtKB/TrEMBL;Acc:A0A078J971]
Coordinates
chrLK034083:-:15637..16870
Molecular Weight (calculated)
14433.2 Da
IEP (calculated)
4.840
GRAVY (calculated)
-0.120
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWQTYVDEH LMCDVGDGQG HHLAAAAIFG HDGSVWAQSA NFPQFKGQEF ASIMKDFDEP GHLAPTGLFL AGAKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLI EQDL
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLI EQDL
001: MSWQSYVDDH LMCDVEGNHL TAAAILGQDG SVWAQSAKFP QLKPQEIDGI KKDFEEPGFL APTGLFLGGE KYMVIQGEQG AVIRGKKGPG GVTIKKTNQA
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L
Arabidopsis Description
PRO1Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42449]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.