Factsheet for PGSC0003DMT400069000

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g044630.1.1	Tomato	cytosol	98.5	98.5
PGSC0003DMT400042529	Potato	cytosol	86.47	87.79
KRH49003	Soybean	cytosol	83.46	83.46
KRH60195	Soybean	cytosol	82.71	82.71
KRH41476	Soybean	cytosol	81.95	81.95
KRH74207	Soybean	cytosol	81.95	81.95
Bra036705.1-P	Field mustard	cytosol	81.95	81.34
VIT_11s0016g02940.t01	Wine grape	cytosol	81.2	81.2
CDY03342	Canola	cytosol	81.2	80.6
GSMUA_Achr1P11580_001	Banana	cytosol	78.95	80.15
CDY06821	Canola	cytosol	80.45	79.85
CDY48612	Canola	cytosol	80.45	79.85
CDY47769	Canola	cytosol	80.45	79.85
CDY30218	Canola	cytosol	80.45	79.85
Bra024148.1-P	Field mustard	cytosol	80.45	79.85
Bra011098.1-P	Field mustard	cytosol	80.45	79.85
PGSC0003DMT400047737	Potato	cytosol	78.2	79.39
CDY35887	Canola	cytosol	79.7	79.1
CDX81945	Canola	cytosol	79.7	79.1
Bra039019.1-P	Field mustard	cytosol	79.7	79.1
GSMUA_Achr6P22530_001	Banana	cytosol	77.44	78.63
GSMUA_Achr5P09300_001	Banana	cytosol	77.44	78.63
CDY62034	Canola	cytosol	78.95	78.36
AT2G19770.1	Thale cress	cytosol	78.95	78.36
CDY14215	Canola	cytosol	78.95	78.36
Bra031101.1-P	Field mustard	cytosol	78.95	78.36
Bra010331.1-P	Field mustard	cytosol	78.95	78.36
AT4G29340.1	Thale cress	cytosol	78.95	78.36
GSMUA_Achr4P01030_001	Banana	cytosol	76.69	77.86
PGSC0003DMT400065464	Potato	cytosol	76.69	77.86
GSMUA_Achr9P00090_001	Banana	cytosol	75.94	77.1
CDY48726	Canola	cytosol	66.17	76.52
GSMUA_Achr1P04950_001	Banana	cytosol	71.43	72.52
PGSC0003DMT400088098	Potato	cytosol	71.43	71.97
PGSC0003DMT400000786	Potato	cytosol	70.68	71.76
CDX82721	Canola	cytosol	52.63	50.36

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	UniProt:M1CJS2	PFAM:PF00235
InterPro:PFN	InterPro:PFN_sf	EnsemblPlantsGene:PGSC0003DMG400026837	PGSC:PGSC0003DMG400026837	EnsemblPlants:PGSC0003DMT400069000	PRINTS:PR00392
PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392
SUPFAM:SSF55770	UniParc:UPI0002956D98	SEG:seg	:	:	:

Description

Profilin-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400026837]

Coordinates

chr12:+:51361720..51363121

Molecular Weight (calculated)

14428.3 Da

IEP (calculated)

4.850

GRAVY (calculated)

-0.110

Length

133 amino acids

Sequence
(BLAST)

001: MSWQTYVDDH LMCDIEGTGR HLSSAAILGF DGSVWAQSPN FPKFKAEEIT NIMKDFDEPG HLAPTGLFLA GTKYMVIQGE PGAVIRGKKG AGGITIKKTA
101: QALIFGVYEE PVTPGQCNMV VEKIGDYLVD QGY

Best Arabidopsis Sequence Match ( AT4G29340.1 )
(BLAST)

001: MSWQTYVDEH LMCDVGDGQG HHLTAAAIVG HDGSVWAQSA NFPQFKGQEF SDIMKDFDEP GHLAPTGLFM AGAKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLL EQGL

Arabidopsis Description

PRO3Profilin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q38904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.