Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011098.1-P | Field mustard | cytosol | 96.27 | 96.27 |
| CDY06821 | Canola | cytosol | 96.27 | 96.27 |
| CDY30218 | Canola | cytosol | 96.27 | 96.27 |
| CDY47769 | Canola | cytosol | 96.27 | 96.27 |
| CDY48612 | Canola | cytosol | 96.27 | 96.27 |
| Bra024148.1-P | Field mustard | cytosol | 95.52 | 95.52 |
| CDY62034 | Canola | cytosol | 94.78 | 94.78 |
| Bra010331.1-P | Field mustard | cytosol | 94.03 | 94.03 |
| CDY14215 | Canola | cytosol | 94.03 | 94.03 |
| AT2G19770.1 | Thale cress | cytosol | 91.04 | 91.04 |
| KRH60195 | Soybean | cytosol | 82.84 | 83.46 |
| KRH41476 | Soybean | cytosol | 82.84 | 83.46 |
| VIT_11s0016g02940.t01 | Wine grape | cytosol | 81.34 | 81.95 |
| KRH49003 | Soybean | cytosol | 79.85 | 80.45 |
| KRH74207 | Soybean | cytosol | 79.1 | 79.7 |
| PGSC0003DMT400042529 | Potato | cytosol | 77.61 | 79.39 |
| Solyc12g044630.1.1 | Tomato | cytosol | 78.36 | 78.95 |
| PGSC0003DMT400069000 | Potato | cytosol | 78.36 | 78.95 |
| GSMUA_Achr5P09300_001 | Banana | cytosol | 76.87 | 78.63 |
| Solyc06g066410.2.1 | Tomato | cytosol, unclear | 76.87 | 78.63 |
| GSMUA_Achr1P11580_001 | Banana | cytosol | 75.37 | 77.1 |
| GSMUA_Achr9P00090_001 | Banana | cytosol | 75.37 | 77.1 |
| GSMUA_Achr4P01030_001 | Banana | cytosol | 74.63 | 76.34 |
| GSMUA_Achr1P04950_001 | Banana | cytosol | 74.63 | 76.34 |
| AT2G19760.1 | Thale cress | cytosol | 73.88 | 75.57 |
| GSMUA_Achr6P22530_001 | Banana | cytosol | 73.88 | 75.57 |
| AT5G56600.1 | Thale cress | cytosol | 73.13 | 74.81 |
| AT4G29350.1 | Thale cress | cytosol | 71.64 | 73.28 |
| PGSC0003DMT400088098 | Potato | cytosol | 67.16 | 68.18 |
| Solyc11g071210.1.1 | Tomato | cytosol | 14.18 | 59.38 |
Protein Annotations
| MapMan:20.2.2.3 | Gene3D:3.30.450.30 | EntrezGene:829055 | UniProt:A0A178UXH3 | ProteinID:AAB39477.1 | ProteinID:AAG10091.1 |
| ProteinID:AEE85619.1 | ArrayExpress:AT4G29340 | EnsemblPlantsGene:AT4G29340 | RefSeq:AT4G29340 | TAIR:AT4G29340 | RefSeq:AT4G29340-TAIR-G |
| EnsemblPlants:AT4G29340.1 | TAIR:AT4G29340.1 | EMBL:AY085179 | EMBL:BT024816 | ProteinID:CAB79692.1 | GO:GO:0003674 |
| GO:GO:0003779 | GO:GO:0003785 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005938 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0042989 | GO:GO:0048046 |
| RefSeq:NP_194663.1 | ProteinID:OAO98230.1 | PFAM:PF00235 | InterPro:PFN | InterPro:PFN_sf | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020047 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00392 | PRINTS:PR01640 | Symbol:PRF4 | ScanProsite:PS00414 |
| PANTHER:PTHR11604 | PANTHER:PTHR11604:SF7 | InterPro:Profilin_CS | UniProt:Q29PU0 | UniProt:Q38904 | SMART:SM00392 |
| SUPFAM:SSF55770 | UniParc:UPI00000013EC | SEG:seg | : | : | : |
Description
PRO3Profilin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q38904]
Coordinates
chr4:+:14447338..14448698
Molecular Weight (calculated)
14419.2 Da
IEP (calculated)
4.840
GRAVY (calculated)
-0.164
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWQTYVDEH LMCDVGDGQG HHLTAAAIVG HDGSVWAQSA NFPQFKGQEF SDIMKDFDEP GHLAPTGLFM AGAKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLL EQGL
101: GQSCVFGIYE EPVTPGQCNM VVERLGDYLL EQGL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.