Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81945 | Canola | cytosol | 96.27 | 96.27 |
| Bra039019.1-P | Field mustard | cytosol | 95.52 | 95.52 |
| CDY35887 | Canola | cytosol | 95.52 | 95.52 |
| CDY03342 | Canola | cytosol | 94.78 | 94.78 |
| Bra031101.1-P | Field mustard | cytosol | 94.03 | 94.03 |
| Bra036705.1-P | Field mustard | cytosol | 94.03 | 94.03 |
| AT4G29340.1 | Thale cress | cytosol | 91.04 | 91.04 |
| CDY48726 | Canola | cytosol | 74.63 | 86.96 |
| KRH60195 | Soybean | cytosol | 85.07 | 85.71 |
| KRH41476 | Soybean | cytosol | 83.58 | 84.21 |
| VIT_11s0016g02940.t01 | Wine grape | cytosol | 79.85 | 80.45 |
| KRH49003 | Soybean | cytosol | 79.1 | 79.7 |
| Solyc12g044630.1.1 | Tomato | cytosol | 78.36 | 78.95 |
| PGSC0003DMT400069000 | Potato | cytosol | 78.36 | 78.95 |
| KRH74207 | Soybean | cytosol | 78.36 | 78.95 |
| PGSC0003DMT400042529 | Potato | cytosol | 76.87 | 78.63 |
| GSMUA_Achr1P11580_001 | Banana | cytosol | 76.12 | 77.86 |
| GSMUA_Achr5P09300_001 | Banana | cytosol | 76.12 | 77.86 |
| Solyc06g066410.2.1 | Tomato | cytosol, unclear | 76.12 | 77.86 |
| AT2G19760.1 | Thale cress | cytosol | 75.37 | 77.1 |
| GSMUA_Achr1P04950_001 | Banana | cytosol | 74.63 | 76.34 |
| AT5G56600.1 | Thale cress | cytosol | 74.63 | 76.34 |
| GSMUA_Achr9P00090_001 | Banana | cytosol | 74.63 | 76.34 |
| GSMUA_Achr4P01030_001 | Banana | cytosol | 74.63 | 76.34 |
| GSMUA_Achr6P22530_001 | Banana | cytosol | 73.13 | 74.81 |
| AT4G29350.1 | Thale cress | cytosol | 72.39 | 74.05 |
| PGSC0003DMT400088098 | Potato | cytosol | 66.42 | 67.42 |
| CDX82721 | Canola | cytosol | 65.67 | 63.31 |
| Solyc11g071210.1.1 | Tomato | cytosol | 13.43 | 56.25 |
Protein Annotations
| MapMan:20.2.2.3 | Gene3D:3.30.450.30 | EntrezGene:816496 | ProteinID:AAB39479.1 | ProteinID:AAC62139.1 | ProteinID:AEC06924.1 |
| ArrayExpress:AT2G19770 | EnsemblPlantsGene:AT2G19770 | RefSeq:AT2G19770 | TAIR:AT2G19770 | RefSeq:AT2G19770-TAIR-G | EnsemblPlants:AT2G19770.1 |
| TAIR:AT2G19770.1 | EMBL:AY085645 | EMBL:DQ446526 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0003785 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005938 | GO:GO:0008150 | GO:GO:0009524 | GO:GO:0009987 |
| GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030036 | GO:GO:0042989 | RefSeq:NP_179567.1 | PFAM:PF00235 |
| InterPro:PFN | InterPro:PFN_sf | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0020047 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00392 | PRINTS:PR01640 | Symbol:PRF5 |
| ScanProsite:PS00414 | PANTHER:PTHR11604 | PANTHER:PTHR11604:SF7 | InterPro:Profilin_CS | UniProt:Q1PF40 | UniProt:Q38905 |
| SMART:SM00392 | SUPFAM:SSF55770 | UniParc:UPI00000013FA | SEG:seg | : | : |
Description
PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
Coordinates
chr2:-:8519485..8521275
Molecular Weight (calculated)
14550.5 Da
IEP (calculated)
4.841
GRAVY (calculated)
-0.151
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.