CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036705.1-P	Field mustard	cytosol	99.25	99.25
CDX81945	Canola	cytosol	98.51	98.51
CDY35887	Canola	cytosol	97.76	97.76
AT2G19770.1	Thale cress	cytosol	94.78	94.78
CDY48612	Canola	cytosol	93.28	93.28
CDY47769	Canola	cytosol	93.28	93.28
CDY30218	Canola	cytosol	93.28	93.28
CDY06821	Canola	cytosol	93.28	93.28
CDY48726	Canola	cytosol	79.1	92.17
CDY62034	Canola	cytosol	91.79	91.79
CDY14215	Canola	cytosol	91.04	91.04
KRH60195	Soybean	cytosol	84.33	84.96
KRH41476	Soybean	cytosol	83.58	84.21
KRH49003	Soybean	cytosol	81.34	81.95
VIT_11s0016g02940.t01	Wine grape	cytosol	80.6	81.2
Solyc12g044630.1.1	Tomato	cytosol	80.6	81.2
PGSC0003DMT400069000	Potato	cytosol	80.6	81.2
KRH74207	Soybean	cytosol	80.6	81.2
PGSC0003DMT400042529	Potato	cytosol	77.61	79.39
CDY32870	Canola	cytosol	77.61	79.39
CDY64971	Canola	cytosol	76.87	78.63
GSMUA_Achr5P09300_001	Banana	cytosol	76.87	78.63
GSMUA_Achr1P11580_001	Banana	cytosol	76.87	78.63
Solyc06g066410.2.1	Tomato	cytosol, unclear	76.12	77.86
CDY11912	Canola	cytosol	76.12	77.27
CDY48724	Canola	cytosol	75.37	77.1
CDX82720	Canola	cytosol	75.37	77.1
CDY03344	Canola	cytosol	75.37	77.1
CDY68825	Canola	cytosol	75.37	77.1
CDY06819	Canola	cytosol	75.37	77.1
GSMUA_Achr9P00090_001	Banana	cytosol	75.37	77.1
CDX88579	Canola	cytosol	75.37	76.52
CDX81944	Canola	cytosol	74.63	76.34
CDY21648	Canola	cytosol	74.63	76.34
CDY35886	Canola	cytosol	74.63	76.34
GSMUA_Achr1P04950_001	Banana	cytosol	74.63	76.34
GSMUA_Achr4P01030_001	Banana	cytosol	73.88	75.57
GSMUA_Achr6P22530_001	Banana	cytosol	73.13	74.81
PGSC0003DMT400088098	Potato	cytosol	66.42	67.42
CDX82721	Canola	cytosol	66.42	64.03
Solyc11g071210.1.1	Tomato	cytosol	14.18	59.38
CDY03443	Canola	cytosol	28.36	56.72
CDY40192	Canola	cytosol, plastid	24.63	42.31
CDX99366	Canola	cytosol, mitochondrion, vacuole	38.06	41.13
CDY13363	Canola	peroxisome, plasma membrane, plastid	45.52	17.68

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	GO:A0A078EQJ2	EnsemblPlants:CDY03342	ProteinID:CDY03342	ProteinID:CDY03342.1
GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00115952001	PFAM:PF00235
InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392	PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604
PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392	SUPFAM:SSF55770	UniParc:UPI0004EDCB0B	SEG:seg

Description

BnaC09g10060D

Coordinates

chrLK031942:+:900104..901424

Molecular Weight (calculated)

14583.5 Da

IEP (calculated)

4.671

GRAVY (calculated)

-0.197

Length

134 amino acids

Sequence
(BLAST)

001: MSWQTYVDEH LMCDVGDGQG HHLTSAAIIG HDGSVWAQSA NFPQFKPQEM TDIMKDFDEP GHLAPTGLFL AGLKYMVIQG EPGAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLV EQDL

Best Arabidopsis Sequence Match ( AT2G19770.1 )
(BLAST)

001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL

Arabidopsis Description

PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.