CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039019.1-P	Field mustard	cytosol	100.0	100.0
CDX81945	Canola	cytosol	97.76	97.76
CDY03342	Canola	cytosol	97.76	97.76
AT2G19770.1	Thale cress	cytosol	95.52	95.52
CDY48612	Canola	cytosol	91.79	91.79
CDY47769	Canola	cytosol	91.79	91.79
CDY30218	Canola	cytosol	91.79	91.79
CDY06821	Canola	cytosol	91.79	91.79
CDY62034	Canola	cytosol	91.04	91.04
CDY14215	Canola	cytosol	90.3	90.3
CDY48726	Canola	cytosol	76.87	89.57
KRH60195	Soybean	cytosol	83.58	84.21
KRH41476	Soybean	cytosol	82.84	83.46
CDY32870	Canola	cytosol	79.1	80.92
KRH49003	Soybean	cytosol	79.85	80.45
CDY64971	Canola	cytosol	78.36	80.15
Solyc12g044630.1.1	Tomato	cytosol	79.1	79.7
PGSC0003DMT400069000	Potato	cytosol	79.1	79.7
PGSC0003DMT400042529	Potato	cytosol	77.61	79.39
VIT_11s0016g02940.t01	Wine grape	cytosol	78.36	78.95
KRH74207	Soybean	cytosol	78.36	78.95
CDY11912	Canola	cytosol	77.61	78.79
GSMUA_Achr1P11580_001	Banana	cytosol	76.87	78.63
CDX88579	Canola	cytosol	76.87	78.03
Solyc06g066410.2.1	Tomato	cytosol, unclear	76.12	77.86
CDX82720	Canola	cytosol	75.37	77.1
CDY48724	Canola	cytosol	75.37	77.1
CDY03344	Canola	cytosol	75.37	77.1
CDY06819	Canola	cytosol	75.37	77.1
CDY68825	Canola	cytosol	75.37	77.1
GSMUA_Achr5P09300_001	Banana	cytosol	75.37	77.1
GSMUA_Achr9P00090_001	Banana	cytosol	75.37	77.1
CDX81944	Canola	cytosol	74.63	76.34
CDY21648	Canola	cytosol	74.63	76.34
GSMUA_Achr1P04950_001	Banana	cytosol	74.63	76.34
CDY35886	Canola	cytosol	74.63	76.34
GSMUA_Achr4P01030_001	Banana	cytosol	73.88	75.57
GSMUA_Achr6P22530_001	Banana	cytosol	73.13	74.81
PGSC0003DMT400088098	Potato	cytosol	65.67	66.67
CDX82721	Canola	cytosol	68.66	66.19
CDY03443	Canola	cytosol	29.85	59.7
Solyc11g071210.1.1	Tomato	cytosol	14.18	59.38
CDX99366	Canola	cytosol, mitochondrion, vacuole	38.06	41.13
CDY40192	Canola	cytosol, plastid	23.88	41.03
CDY13363	Canola	peroxisome, plasma membrane, plastid	47.01	18.26

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	GO:A0A078HDJ0	UniProt:A0A078HDJ0	EnsemblPlants:CDY35887	ProteinID:CDY35887
ProteinID:CDY35887.1	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	EnsemblPlantsGene:GSBRNA2T00059430001	PFAM:PF00235	InterPro:PFN
InterPro:PFN_sf	PRINTS:PR00392	PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7
InterPro:Profilin_CS	SMART:SM00392	SUPFAM:SSF55770	UniParc:UPI0002541001	SEG:seg	:

Description

BnaA07g01000DProfilin [Source:UniProtKB/TrEMBL;Acc:A0A078HDJ0]

Coordinates

chrLK032363:-:136829..138322

Molecular Weight (calculated)

14630.6 Da

IEP (calculated)

4.521

GRAVY (calculated)

-0.166

Length

134 amino acids

Sequence
(BLAST)

001: MSWQTYVDEH LMCDVGDGQG HHLTSAAIIG LDGSVWAQSA NFPQFKPQEM TDIMKDFDEP GHLAPTGLFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQDL

Best Arabidopsis Sequence Match ( AT2G19770.1 )
(BLAST)

001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL

Arabidopsis Description

PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.