Factsheet for VIT_09s0002g03250.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

extracellular: 27664331

msms PMID: 27664331 doi

P Pérez-Bermúdez, J Blesa, JM Soriano, A Marcilla

Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, Burjassot, Valencia, Spain., Grupo de Ciencias de la Alimentación Basada en la Evidencia y Experimentación (CiAlBEx), Instituto de Ciencias de los Materiales, Parque Científico, Universitat de València, Paterna, Spain; Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain., Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain; Àrea de Parasitologia, Departament de Farmàcia i Tecnologia Farmacèutica i Parasitologia, Universitat de València, Burjassot, Valencia, Spain. Electronic address: antonio.marcilla@uv.es.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g00490.t01	Wine grape	cytosol	87.02	87.02
VIT_11s0016g02940.t01	Wine grape	cytosol	87.79	86.47
VIT_11s0016g02950.t01	Wine grape	cytosol	84.73	84.73
GSMUA_Achr1P11580_001	Banana	cytosol	82.44	82.44
GSMUA_Achr5P09300_001	Banana	cytosol	81.68	81.68
GSMUA_Achr6P22530_001	Banana	cytosol	81.68	81.68
GSMUA_Achr4P01030_001	Banana	cytosol	80.92	80.92
GSMUA_Achr9P00090_001	Banana	cytosol	80.92	80.92
KRH09953	Soybean	cytosol	80.92	80.92
GSMUA_Achr1P04950_001	Banana	cytosol	76.34	76.34

Protein Annotations

EntrezGene:100254869	wikigene:100254869	MapMan:20.2.2.3	Gene3D:3.30.450.30	UniProt:A5ASF9	EMBL:AM433818
ProteinID:CAN80411	ProteinID:CAN80411.1	ProteinID:CBI36040	ProteinID:CBI36040.3	EMBL:FN596494	GO:GO:0003674
GO:GO:0003779	GO:GO:0003785	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005938	GO:GO:0008150	GO:GO:0009987
GO:GO:0015629	GO:GO:0016043	GO:GO:0042989	EntrezGene:LOC100254869	wikigene:LOC100254869	PFAM:PF00235
InterPro:PFN	InterPro:PFN_sf	PRINTS:PR00392	PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604
PANTHER:PTHR11604:SF7	InterPro:Profilin_CS	SMART:SM00392	SUPFAM:SSF55770	TIGR:TC53180	UniParc:UPI0001523CBD
ArrayExpress:VIT_09s0002g03250	EnsemblPlantsGene:VIT_09s0002g03250	EnsemblPlants:VIT_09s0002g03250.t01	RefSeq:XP_002283490	RefSeq:XP_002283490.1	:

Description

Profilin [Source:UniProtKB/TrEMBL;Acc:A5ASF9]

Coordinates

chr9:+:2978989..2981667

Molecular Weight (calculated)

14229.0 Da

IEP (calculated)

4.363

GRAVY (calculated)

-0.150

Length

131 amino acids

Sequence
(BLAST)

001: MSWQTYVDDH LMCDIDGNHL TSAAIIGHDG SVWAQSETFP QFKPEEITGI MNDFNEPGFL APTGLYLGGT KYMVIQGEPG AVIRGKKGSG GVTIKKTGQA
101: LIFGIYEEPL TPGQCNMIVE RMGDYLVDQG L

Best Arabidopsis Sequence Match ( AT2G19770.1 )
(BLAST)

001: MSWQAYVDEH LMCDVGDGQG HHLTAAAIIG HDGSVWAQSA NFPQFKPQEI TDIMKDFDEP GHLAPTGMFL AGLKYMVIQG EPNAVIRGKK GAGGITIKKT
101: GQSMVFGLYE EPVTPGQCNM VVERLGDYLI EQGL

Arabidopsis Description

PRO4Profilin [Source:UniProtKB/TrEMBL;Acc:Q1PF40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.