Factsheet for GSMUA_Achr3P17580_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P14890_001	Banana	cytosol	91.6	91.6
GSMUA_Achr10P...	Banana	cytosol	90.84	90.84
GSMUA_Achr7P13660_001	Banana	cytosol	89.31	89.31
GSMUA_Achr2P19390_001	Banana	cytosol	87.79	87.79
TraesCS3D01G110000.1	Wheat	cytosol	85.5	85.5
TraesCS3A01G108200.1	Wheat	cytosol	85.5	85.5
GSMUA_Achr8P20180_001	Banana	cytosol	85.5	85.5
VIT_11s0016g02950.t01	Wine grape	cytosol	84.73	84.73
TraesCS3B01G127200.1	Wheat	cytosol	84.73	84.73
HORVU3Hr1G019670.1	Barley	cytosol	84.73	84.73
KRH60197	Soybean	cytosol	83.97	83.97
GSMUA_Achr5P06510_001	Banana	cytosol	83.21	83.21
PGSC0003DMT400047737	Potato	cytosol	82.44	82.44
KRH41477	Soybean	nucleus	82.44	82.44
PGSC0003DMT400065464	Potato	cytosol	80.15	80.15
Solyc11g070130.1.1	Tomato	extracellular	80.15	80.15
KRH41478	Soybean	cytosol	80.15	80.15
GSMUA_Achr9P00090_001	Banana	cytosol	79.39	79.39
GSMUA_Achr6P22530_001	Banana	cytosol	79.39	79.39
GSMUA_Achr4P01030_001	Banana	cytosol	78.63	78.63
Solyc08g066110.2.1	Tomato	plastid	77.86	77.86
GSMUA_Achr5P09300_001	Banana	cytosol	77.86	77.86
GSMUA_Achr1P11580_001	Banana	cytosol	77.86	77.86
PGSC0003DMT400000786	Potato	cytosol	75.57	75.57
GSMUA_Achr1P04950_001	Banana	cytosol	74.81	74.81
Solyc12g008590.1.1	Tomato	cytosol	53.44	71.43
Os01t0191150-00	Rice	endoplasmic reticulum, extracellular	25.19	56.9
KXG31648	Sorghum	plastid	58.02	41.08

Protein Annotations

MapMan:20.2.2.3	Gene3D:3.30.450.30	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	EnsemblPlantsGene:GSMUA_Achr3G17580_001
EnsemblPlants:GSMUA_Achr3P17580_001	EnsemblPlants:GSMUA_Achr3T17580_001	UniProt:M0SFH4	PFAM:PF00235	InterPro:PFN	InterPro:PFN_sf
PRINTS:PR00392	PRINTS:PR01640	ScanProsite:PS00414	PANTHER:PTHR11604	PANTHER:PTHR11604:SF7	InterPro:Profilin_CS
SMART:SM00392	SUPFAM:SSF55770	UniParc:UPI000295623B	:	:	:

Description

Profilin [Source:GMGC_GENE;Acc:GSMUA_Achr3G17580_001]

Coordinates

chr3:-:19115058..19118634

Molecular Weight (calculated)

14101.0 Da

IEP (calculated)

4.339

GRAVY (calculated)

-0.009

Length

131 amino acids

Sequence
(BLAST)

001: MSWQTYVDDH LLCDIDGQCL TAAAIVGHDG SVWAQSDVFP QCKPEEIAAI MKDFDEPGSL APTGLYLGGT KYMVIQGEPG AVIRGKKGSG GVTIKKTNLA
101: LIIGIYNEPM TPGQCNMVVE RLGDYLFDQG F

Best Arabidopsis Sequence Match ( AT2G19760.1 )
(BLAST)

001: MSWQSYVDDH LMCDVEGNHL TAAAILGQDG SVWAQSAKFP QLKPQEIDGI KKDFEEPGFL APTGLFLGGE KYMVIQGEQG AVIRGKKGPG GVTIKKTNQA
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L

Arabidopsis Description

PRO1Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42449]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.