Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400000786 | Potato | cytosol | 87.76 | 65.65 |
| Solyc11g071210.1.1 | Tomato | cytosol | 21.43 | 65.62 |
| VIT_04s0008g00490.t01 | Wine grape | cytosol | 74.49 | 55.73 |
| GSMUA_Achr2P19390_001 | Banana | cytosol | 73.47 | 54.96 |
| GSMUA_Achr5P06510_001 | Banana | cytosol | 72.45 | 54.2 |
| Solyc11g070130.1.1 | Tomato | extracellular | 72.45 | 54.2 |
| GSMUA_Achr8P20180_001 | Banana | cytosol | 71.43 | 53.44 |
| GSMUA_Achr3P17580_001 | Banana | cytosol | 71.43 | 53.44 |
| GSMUA_Achr7P13660_001 | Banana | cytosol | 70.41 | 52.67 |
| Solyc08g066110.2.1 | Tomato | plastid | 69.39 | 51.91 |
| TraesCS3A01G108200.1 | Wheat | cytosol | 69.39 | 51.91 |
| HORVU3Hr1G019670.1 | Barley | cytosol | 68.37 | 51.15 |
| GSMUA_Achr10P... | Banana | cytosol | 68.37 | 51.15 |
| TraesCS3D01G110000.1 | Wheat | cytosol | 68.37 | 51.15 |
| TraesCS3B01G127200.1 | Wheat | cytosol | 68.37 | 51.15 |
| GSMUA_Achr6P14890_001 | Banana | cytosol | 67.35 | 50.38 |
| Solyc12g044630.1.1 | Tomato | cytosol | 66.33 | 48.87 |
| Solyc06g066410.2.1 | Tomato | cytosol, unclear | 65.31 | 48.85 |
| KXG31648 | Sorghum | plastid | 53.06 | 28.11 |
| Os01t0191150-00 | Rice | endoplasmic reticulum, extracellular | 9.18 | 15.52 |
Protein Annotations
| MapMan:20.2.2.3 | Gene3D:3.30.450.30 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0003785 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 |
| GO:GO:0005938 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0042989 |
| UniProt:K4DBU7 | PFAM:PF00235 | InterPro:PFN | InterPro:PFN_sf | PRINTS:PR00392 | PRINTS:PR01640 |
| ScanProsite:PS00414 | PANTHER:PTHR11604 | PANTHER:PTHR11604:SF7 | InterPro:Profilin_CS | SMART:SM00392 | SUPFAM:SSF55770 |
| EnsemblPlantsGene:Solyc12g008590.1 | EnsemblPlants:Solyc12g008590.1.1 | UniParc:UPI0002769572 | : | : | : |
Description
Profilin [Source:UniProtKB/TrEMBL;Acc:K4DBU7]
Coordinates
chr12:-:1974943..1979725
Molecular Weight (calculated)
10813.9 Da
IEP (calculated)
6.235
GRAVY (calculated)
-0.246
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MSWQVYVDDH LLCEIEGNHL SAAAIVGLDG AVWAKSSTFP QFKPSEIDAI LNDFNEPGSL APTGLHLGGS KYMVIQGEPG VVIRGKKKRT GWYYYQKD
001: MSWQSYVDDH LMCDVEGNHL TAAAILGQDG SVWAQSAKFP QLKPQEIDGI KKDFEEPGFL APTGLFLGGE KYMVIQGEQG AVIRGKKGPG GVTIKKTNQA
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L
101: LVFGFYDEPM TGGQCNLVVE RLGDYLIESE L
Arabidopsis Description
PRO1Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42449]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.