Factsheet for Bra028902.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04838	Canola	mitochondrion	98.32	98.32
AT5G01420.1	Thale cress	cytosol	73.18	65.34
Zm00001d012904_P001	Maize	cytosol	13.69	39.52
Bra005786.1-P	Field mustard	cytosol	11.73	38.53
Bra005898.1-P	Field mustard	cytosol, mitochondrion	25.98	37.65
PGSC0003DMT400054970	Potato	cytosol, mitochondrion	25.14	36.89
Os07t0159900-01	Rice	mitochondrion	26.26	36.72
Bra009197.1-P	Field mustard	cytosol	24.3	35.95
Zm00001d007885_P001	Maize	mitochondrion	22.35	35.71
VIT_13s0073g00520.t01	Wine grape	cytosol	37.15	35.37
Solyc11g006430.1.1	Tomato	cytosol	35.2	34.9
PGSC0003DMT400005022	Potato	cytosol	35.2	34.33
KRH34627	Soybean	cytosol	35.2	34.15
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	27.93	33.44
KRG92161	Soybean	cytosol	35.47	33.42
TraesCS2A01G249000.1	Wheat	mitochondrion	24.86	32.96
TraesCS2B01G263800.1	Wheat	mitochondrion	24.58	32.59
EER95886	Sorghum	mitochondrion	24.86	32.48
Os03t0648800-00	Rice	mitochondrion	29.33	32.41
HORVU2Hr1G059940.1	Barley	mitochondrion	24.3	32.22
TraesCS5B01G374300.1	Wheat	mitochondrion	28.21	32.06
TraesCS5D01G381700.1	Wheat	mitochondrion	28.77	31.99
TraesCS2D01G250600.1	Wheat	mitochondrion	24.02	31.85
Bra002640.1-P	Field mustard	cytosol	10.34	31.36
Bra023284.1-P	Field mustard	cytosol	26.26	31.33
HORVU5Hr1G092580.1	Barley	cytosol	20.95	30.99
Zm00001d018827_P001	Maize	mitochondrion	23.18	30.86
Bra000716.1-P	Field mustard	cytosol	26.54	30.65
Zm00001d033205_P001	Maize	mitochondrion	29.61	30.64
TraesCS5A01G372200.1	Wheat	mitochondrion	27.93	30.4
EER91159	Sorghum	mitochondrion	29.89	30.06
Zm00001d013668_P001	Maize	mitochondrion	28.49	29.14
Bra028812.1-P	Field mustard	nucleus	27.93	28.65
Bra008801.1-P	Field mustard	plastid	20.39	27.34
Bra020363.1-P	Field mustard	cytosol, plastid	18.99	26.98
Bra006216.1-P	Field mustard	plastid	19.55	26.52
Bra004972.1-P	Field mustard	mitochondrion	16.76	24.29
Bra004971.1-P	Field mustard	plastid	15.92	22.53
Bra016941.1-P	Field mustard	plastid	21.79	21.2
Bra040917.1-P	Field mustard	cytosol	21.23	21.11
Bra033062.1-P	Field mustard	cytosol	19.55	20.77
Bra000225.1-P	Field mustard	plastid	22.35	19.95
Bra025357.1-P	Field mustard	cytosol	22.35	19.46
Bra025638.1-P	Field mustard	cytosol	22.07	19.27
Bra007299.1-P	Field mustard	plastid	21.23	19.24
Bra039044.1-P	Field mustard	cytosol	22.07	18.72
Bra014646.1-P	Field mustard	plastid	20.39	18.58

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EnsemblPlantsGene:Bra028902	EnsemblPlants:Bra028902.1	EnsemblPlants:Bra028902.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4EJD6	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF195	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00025435CF	SEG:seg

Description

AT5G01420 (E=1e-080) | glutaredoxin family protein

Coordinates

chrA02:+:1499986..1501062

Molecular Weight (calculated)

40074.6 Da

IEP (calculated)

4.541

GRAVY (calculated)

-0.439

Length

358 amino acids

Sequence
(BLAST)

001: MKSSRMKFAK KLKSIRAAGE YLNQDRILQV LSAADELLPK ISNQITAGSM MWRAPPQHQI DDATTELAEN ENKGEEASGN EENIRPPVNQ IPRDIKSAVM
101: GRKSLGSGFR RPELNSITLF DPKLLEAFEL AVGCFRRIND LSRNPNLDED EDVIAFPADE SGMEKVSIED TLPPLDDEQE EEEDRGQDLE IVAEEEPVLG
201: FEERCPPGGE ESVVFYTTSL RGIRKTFDDC NMIRFLLDSF KVKYYERDVS MHIHYRDELR SISAAAEETE VLPPVLFVKG RCIGGAQRVL GLHEQGKFRA
301: LFEGVPVAGD TPCGRCDGFR FLMCDGCRGS RRIVSTDGSR IQCLLCNENG LIVCLDCS

Best Arabidopsis Sequence Match ( AT5G01420.1 )
(BLAST)

001: MKSSRMKFAK KLKSIRAGEY LNQDRILQVL SAADEFLPKI SNHIPQITSA ASIWRTPQKS ENQIANVTEL LENVRQGEEE ASGNFVGDEE NVRPPVNQIP
101: RVPCDRKESK LAVSCGSDTG IGRKSFGSGF RRPDLNSTTL FDPKLLEAFE LAALCFRKIK DFSREARVND EDDIVFPEEE EIRKDGNSIP PVISVVEYRR
201: KDENVVVLHK DDGNALQIVN AIREEVIGEE DIGKDGNTLM DPLLEFEERC PPGGEESVVF YTTTLRGIRK TFDDCNMIRF LLDSFKVKYY ERDVSMHREY
301: REELRRISAA ETEVLPPVLF VKGRCIGGAQ RVLGLHEQGK FKILFEGIPI TGDERCRRCD GFRFLMCDGC RGSRRIISGD GSRIQCLICN ENGLIVCVGC
401: S

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9M031]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.