Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400005022 | Potato | cytosol | 95.57 | 94.01 |
| VIT_13s0073g00520.t01 | Wine grape | cytosol | 57.62 | 55.32 |
| KRG92161 | Soybean | cytosol | 53.74 | 51.05 |
| KRH34627 | Soybean | cytosol | 52.08 | 50.95 |
| GSMUA_Achr6P03120_001 | Banana | cytosol, mitochondrion | 35.73 | 43.14 |
| Zm00001d012904_P001 | Maize | cytosol | 13.3 | 38.71 |
| Os07t0159900-01 | Rice | mitochondrion | 27.42 | 38.67 |
| Zm00001d007885_P001 | Maize | mitochondrion | 23.27 | 37.5 |
| Os03t0648800-00 | Rice | mitochondrion | 32.13 | 35.8 |
| Solyc11g005270.1.1 | Tomato | cytosol | 18.84 | 35.79 |
| CDY04838 | Canola | mitochondrion | 35.18 | 35.47 |
| Bra028902.1-P | Field mustard | mitochondrion | 34.9 | 35.2 |
| HORVU2Hr1G059940.1 | Barley | mitochondrion | 26.32 | 35.19 |
| TraesCS2D01G250600.1 | Wheat | mitochondrion | 26.04 | 34.81 |
| TraesCS2B01G263800.1 | Wheat | mitochondrion | 25.76 | 34.44 |
| TraesCS2A01G249000.1 | Wheat | mitochondrion | 25.76 | 34.44 |
| TraesCS5D01G381700.1 | Wheat | mitochondrion | 30.47 | 34.16 |
| TraesCS5B01G374300.1 | Wheat | mitochondrion | 29.64 | 33.97 |
| TraesCS5A01G372200.1 | Wheat | mitochondrion | 30.75 | 33.74 |
| EER95886 | Sorghum | mitochondrion | 25.48 | 33.58 |
| EER91159 | Sorghum | mitochondrion | 32.69 | 33.15 |
| Zm00001d033205_P001 | Maize | mitochondrion | 31.58 | 32.95 |
| Zm00001d013668_P001 | Maize | mitochondrion | 31.86 | 32.86 |
| Zm00001d018827_P001 | Maize | mitochondrion | 23.82 | 31.97 |
| Solyc06g082180.1.1 | Tomato | cytosol, plastid | 22.44 | 31.89 |
| HORVU5Hr1G092580.1 | Barley | cytosol | 21.33 | 31.82 |
| AT5G01420.1 | Thale cress | cytosol | 35.18 | 31.67 |
| Solyc03g078380.1.1 | Tomato | cytosol | 22.71 | 31.42 |
| Solyc08g083270.1.1 | Tomato | cytosol | 26.87 | 29.66 |
| Solyc09g009860.1.1 | Tomato | cytosol | 32.69 | 29.57 |
| Solyc08g082590.2.1 | Tomato | cytosol | 26.87 | 24.68 |
| Solyc04g039900.1.1 | Tomato | cytosol, extracellular, nucleus | 18.28 | 24.26 |
| Solyc02g067400.1.1 | Tomato | cytosol | 18.84 | 23.94 |
| Solyc02g087850.1.1 | Tomato | cytosol, plastid | 24.38 | 21.0 |
| Solyc10g079560.1.1 | Tomato | plastid | 22.71 | 18.89 |
| Solyc06g082170.2.1 | Tomato | cytosol, plastid | 19.11 | 16.63 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 |
| GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:Glutaredoxin |
| InterPro:IPR002109 | UniProt:K4D4Q6 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF195 |
| SUPFAM:SSF52833 | EnsemblPlantsGene:Solyc11g006430.1 | EnsemblPlants:Solyc11g006430.1.1 | InterPro:Thioredoxin-like_sf | UniParc:UPI0002769DCF | SEG:seg |
Description
No Description!
Coordinates
chr11:-:1136221..1137306
Molecular Weight (calculated)
41465.0 Da
IEP (calculated)
4.672
GRAVY (calculated)
-0.447
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTMKGKLLK KLKTMKTIGY LKPERILFSN ASDGYIHSSP RKSDSSRFNC QSPLTPVQKN VQSSVVDQEA EIIDVSELMK DLEDEEMEIE EDKENVKPVV
101: VNVKKIENFI SPLQPKKENF TTPLLDFDVS NFRRPDLDSG TLFDPNLLAL FEEAVMVVKA QEEERKAKIE EKIFKPLEDD EEKEPPLKAR KLEEIVNPLL
201: EFEEKCPPGG CDSVILYTTG LRGIRKTFED CHSIRFLLEN FRVVFFERDI SMHSEFKEEL WRILDGKVVP PRLFVKGRYI GGADEVLTLH EQGKFRPLLE
301: GIPIDNFQCP CEGCAGMRFI MCFKCNGSRK IVLDDDDEEE VESMKCPECN ENGLIVCPYC C
101: VNVKKIENFI SPLQPKKENF TTPLLDFDVS NFRRPDLDSG TLFDPNLLAL FEEAVMVVKA QEEERKAKIE EKIFKPLEDD EEKEPPLKAR KLEEIVNPLL
201: EFEEKCPPGG CDSVILYTTG LRGIRKTFED CHSIRFLLEN FRVVFFERDI SMHSEFKEEL WRILDGKVVP PRLFVKGRYI GGADEVLTLH EQGKFRPLLE
301: GIPIDNFQCP CEGCAGMRFI MCFKCNGSRK IVLDDDDEEE VESMKCPECN ENGLIVCPYC C
001: MKSSRMKFAK KLKSIRAGEY LNQDRILQVL SAADEFLPKI SNHIPQITSA ASIWRTPQKS ENQIANVTEL LENVRQGEEE ASGNFVGDEE NVRPPVNQIP
101: RVPCDRKESK LAVSCGSDTG IGRKSFGSGF RRPDLNSTTL FDPKLLEAFE LAALCFRKIK DFSREARVND EDDIVFPEEE EIRKDGNSIP PVISVVEYRR
201: KDENVVVLHK DDGNALQIVN AIREEVIGEE DIGKDGNTLM DPLLEFEERC PPGGEESVVF YTTTLRGIRK TFDDCNMIRF LLDSFKVKYY ERDVSMHREY
301: REELRRISAA ETEVLPPVLF VKGRCIGGAQ RVLGLHEQGK FKILFEGIPI TGDERCRRCD GFRFLMCDGC RGSRRIISGD GSRIQCLICN ENGLIVCVGC
401: S
101: RVPCDRKESK LAVSCGSDTG IGRKSFGSGF RRPDLNSTTL FDPKLLEAFE LAALCFRKIK DFSREARVND EDDIVFPEEE EIRKDGNSIP PVISVVEYRR
201: KDENVVVLHK DDGNALQIVN AIREEVIGEE DIGKDGNTLM DPLLEFEERC PPGGEESVVF YTTTLRGIRK TFDDCNMIRF LLDSFKVKYY ERDVSMHREY
301: REELRRISAA ETEVLPPVLF VKGRCIGGAQ RVLGLHEQGK FKILFEGIPI TGDERCRRCD GFRFLMCDGC RGSRRIISGD GSRIQCLICN ENGLIVCVGC
401: S
Arabidopsis Description
Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9M031]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.