Factsheet for Solyc08g082590.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400031969	Potato	cytosol	92.11	92.58
VIT_02s0025g01710.t01	Wine grape	cytosol	55.98	58.2
KRH60067	Soybean	cytosol	47.84	55.79
CDY47842	Canola	cytosol	45.04	49.17
CDY62024	Canola	cytosol	45.04	49.17
Bra040917.1-P	Field mustard	cytosol	44.78	48.89
AT1G64500.1	Thale cress	cytosol	43.0	45.92
GSMUA_Achr10P...	Banana	cytosol	40.46	42.74
Solyc11g005270.1.1	Tomato	cytosol	18.58	38.42
TraesCS3D01G166500.1	Wheat	cytosol	37.91	36.97
TraesCS3B01G189800.1	Wheat	cytosol	38.17	36.95
Zm00001d039270_P001	Maize	cytosol	37.15	36.78
HORVU3Hr1G057240.1	Barley	cytosol	38.17	36.76
Os01t0235900-00	Rice	plasma membrane	36.39	36.57
TraesCS3A01G158800.1	Wheat	cytosol	37.4	36.3
KXG31460	Sorghum	cytosol	35.37	34.75
Solyc08g083270.1.1	Tomato	cytosol	25.7	30.89
Solyc03g078380.1.1	Tomato	cytosol	20.36	30.65
Solyc06g082180.1.1	Tomato	cytosol, plastid	19.08	29.53
Solyc11g006430.1.1	Tomato	cytosol	24.68	26.87
Solyc02g067400.1.1	Tomato	cytosol	19.08	26.41
Solyc09g009860.1.1	Tomato	cytosol	24.94	24.56
Solyc02g087850.1.1	Tomato	cytosol, plastid	25.45	23.87
Solyc04g039900.1.1	Tomato	cytosol, extracellular, nucleus	14.25	20.59
Solyc10g079560.1.1	Tomato	plastid	19.85	17.97
Solyc06g082170.2.1	Tomato	cytosol, plastid	17.56	16.63

Protein Annotations

MapMan:20.5.4	Gene3D:3.40.30.10	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005884	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009902	GO:GO:0009987	GO:GO:0015035	GO:GO:0016043
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0051017	GO:GO:0055114	InterPro:Glutaredoxin
InterPro:IPR002109	UniProt:K4CPQ5	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF61
SUPFAM:SSF52833	EnsemblPlantsGene:Solyc08g082590.2	EnsemblPlants:Solyc08g082590.2.1	InterPro:Thioredoxin-like_sf	UniParc:UPI000276C8C0	SEG:seg

Description

No Description!

Coordinates

chr8:+:65320093..65322178

Molecular Weight (calculated)

44261.5 Da

IEP (calculated)

6.707

GRAVY (calculated)

-0.798

Length

393 amino acids

Sequence
(BLAST)

001: MGCASSKRIK VAIDVYRPPP TSFAVFDINS IEEPWLKSAN NNNKVEENEL DQDELDEDEK PIKVAQPILE KLNTSIDDSP KSWDEVSKAL EDLKPTLQNP
101: PPQKSPKKPL LALPAPPPPP SEAAEDGDGS PKRKIPRKSF SFHTLEELES KLSSKDAKKN NEVIKKNEEN KKFQRFNKKN DTQIAVHNGE VEHQRTHSDE
201: GYKPVKENIF LLRDKMEREK EGKVPNFIKF NPLSDYPEKC PPRGDDSLVI YTTSLGGVRR TFEDCNKLRL ILESHRVVFD ERDVALHGEF RQELKELLGD
301: GEDAGVPRLF VKGRYIGGVE EVVHLNETKK LGRILNWARV ERGLGRLGCE GCGGARFVPC FDCGGSCKVV NGDVKERCPK CNENGLIHCP ICN

Best Arabidopsis Sequence Match ( AT1G64500.1 )
(BLAST)

001: MGCTSSKQAK ANVVADVYKP PPSSFAVFDV NAIQEPWLKF EHEDDEKPPR STVFDRLDED DDDDDDDGDD APKTWEEVSK SLETKLKPAA VKPPEVDSVK
101: PPATPPRRLP RKSASFHTLD ELEVRAKRSI AAQIPTTMVK LKRTESMSKL RPESDDRTES TQSSYSGPRS VKENIFVKRD RERREKEGNK KPVMNWDPLR
201: EFPEKCPPGG GEGLIVYTTS LQGVRRTYED CMRVRAIMEQ QGVVVDERDV SLDAGVLSEL KELLQDEASV APPRVFVKGR YLGGAAEVTA MNENGKLGRV
301: LRWARVERVG EEGRLTCEGC GGARWLPCFE CGGSCKVAAV GAAKGERWER CVKCNENGLI RCPVCFVN

Arabidopsis Description

F1N19.7 [Source:UniProtKB/TrEMBL;Acc:Q9SGW5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.