Factsheet for Solyc09g009860.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023120	Potato	cytosol	95.24	95.0
VIT_08s0007g03220.t01	Wine grape	cytosol	62.66	62.81
CDX80893	Canola	cytosol	15.29	55.96
GSMUA_Achr6P13210_001	Banana	cytosol	38.1	55.07
Bra005786.1-P	Field mustard	cytosol	15.04	55.05
CDY11274	Canola	cytosol	15.04	55.05
CDY14169	Canola	cytosol	33.08	53.88
CDY04902	Canola	nucleus	44.61	51.3
Bra028812.1-P	Field mustard	nucleus	44.36	50.72
AT5G03870.1	Thale cress	cytosol	48.12	50.0
GSMUA_Achr6P18300_001	Banana	cytosol	47.12	48.21
KRH67928	Soybean	cytosol	54.39	47.38
GSMUA_Achr9P02540_001	Banana	cytosol	46.12	46.94
CDX80894	Canola	nucleus	21.05	42.86
CDY11275	Canola	nucleus	20.55	41.41
Solyc11g005270.1.1	Tomato	cytosol	18.8	39.47
HORVU2Hr1G073040.1	Barley	cytosol	40.6	38.57
TraesCS2D01G292800.1	Wheat	mitochondrion	40.35	37.97
TraesCS2A01G295000.1	Wheat	mitochondrion	40.35	37.97
Solyc08g083270.1.1	Tomato	cytosol	31.08	37.92
TraesCS2B01G311500.1	Wheat	mitochondrion	40.1	37.91
EES10743	Sorghum	cytosol	42.61	37.69
Zm00001d003779_P001	Maize	cytosol	41.85	37.36
Os04t0412800-01	Rice	cytosol, plastid	41.6	37.05
Solyc03g078380.1.1	Tomato	cytosol	22.31	34.1
Solyc11g006430.1.1	Tomato	cytosol	29.57	32.69
Solyc04g039900.1.1	Tomato	cytosol, extracellular, nucleus	20.55	30.15
Solyc06g082180.1.1	Tomato	cytosol, plastid	18.55	29.13
Solyc02g067400.1.1	Tomato	cytosol	19.05	26.76
Solyc10g079560.1.1	Tomato	plastid	27.57	25.35
Solyc02g087850.1.1	Tomato	cytosol, plastid	26.32	25.06
Solyc08g082590.2.1	Tomato	cytosol	24.56	24.94
Solyc06g082170.2.1	Tomato	cytosol, plastid	17.04	16.39

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin
InterPro:IPR002109	UniProt:K4CR15	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF79
SUPFAM:SSF52833	EnsemblPlantsGene:Solyc09g009860.1	EnsemblPlants:Solyc09g009860.1.1	InterPro:Thioredoxin-like_sf	UniParc:UPI000276C8E4	SEG:seg

Description

No Description!

Coordinates

chr9:+:3350085..3351284

Molecular Weight (calculated)

44729.2 Da

IEP (calculated)

8.479

GRAVY (calculated)

-0.519

Length

399 amino acids

Sequence
(BLAST)

001: MGCVPSKLFN KKNLRKNGDD YPDHVVSLTS STYGVLNLEK DSNFVRNPPL SIKECVKEIK KSPPHEESHE VINTWELMED LDEEVVVKNS KISPKSRVFL
101: RGFGDIDARS PLKFLNQMSS PRKFKKLSGK ENRGRGNETN LVDFSPKNVL KDCKLMQSPW KMPPRLNFSK KGSPNEVKCD SLKVDSVLVS RRRRSLSPLF
201: DPQLVEAFEK EMSAEEEQIK KMVSATPISR KARHSQEAET MLELFEKKCP PEGENAVVIY TTTLRGIRKT FEDCNTARAI LESNDVRVIE RDISMDSGYK
301: EELRGLMGTK EVKVPLVFVK GRLIGGADEM LKLEEEGKLG ILLDGIPRAA ATCDGCAGIR FVMCMDCNGS RKLLAKDGKS TVKCGDCNEN GLIQCPICC

Best Arabidopsis Sequence Match ( AT5G03870.1 )
(BLAST)

001: MGCVSSKLGK KKLIREIRVN NGGDHIVSLT STTYGHLDLD ERAETSPKSL EVTKGEVFES EIIPRRSIKR DDPEIINTWE LMEDLEDSMH VSNPQKISPK
101: SRGIFGKSWK TPVKSVVESP KRGSSKRFGG KENNSRGVSP NQILKPKNIL ETPKRGVMRL SFPLKSEESS VTVTQRRKSY SPMFDPDLVA SYERELSQEK
201: EQIKMVISPV VHESRKTEKT ERILEKFPEK CPPGGEHSVV IYITTLRGIR KTFEDCNVVR SILDSHEVRF SERDVSMHSV FKEEIRGIMG TKHVKIPAVF
301: VKGRMVGSVE EVMRLEEEGK LGILLEGIPA ARLGGSCCRG CGGMRFMMCV VCNGSCKVRE EEKKSMVKCL KCNENGLVLC PICS

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9LZC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.