Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028812.1-P | Field mustard | nucleus | 99.42 | 98.85 |
| CDY14169 | Canola | cytosol | 68.01 | 96.33 |
| CDY11274 | Canola | cytosol | 26.8 | 85.32 |
| CDX80893 | Canola | cytosol | 26.8 | 85.32 |
| CDX80894 | Canola | nucleus | 46.69 | 82.65 |
| CDY11275 | Canola | nucleus | 45.53 | 79.8 |
| AT5G03870.1 | Thale cress | cytosol | 84.44 | 76.3 |
| GSMUA_Achr6P13210_001 | Banana | cytosol | 38.33 | 48.19 |
| VIT_08s0007g03220.t01 | Wine grape | cytosol | 54.18 | 47.24 |
| Solyc09g009860.1.1 | Tomato | cytosol | 51.3 | 44.61 |
| PGSC0003DMT400023120 | Potato | cytosol | 51.01 | 44.25 |
| CDX93821 | Canola | cytosol | 31.7 | 42.31 |
| CDY01245 | Canola | cytosol | 31.41 | 42.08 |
| KRH67928 | Soybean | cytosol | 54.18 | 41.05 |
| GSMUA_Achr9P02540_001 | Banana | cytosol | 45.82 | 40.56 |
| CDX90765 | Canola | cytosol | 31.12 | 40.45 |
| CDY05109 | Canola | cytosol | 30.84 | 40.38 |
| GSMUA_Achr6P18300_001 | Banana | cytosol | 44.96 | 40.0 |
| CDX74801 | Canola | cytosol | 17.87 | 37.13 |
| TraesCS2A01G295000.1 | Wheat | mitochondrion | 42.94 | 35.14 |
| TraesCS2B01G311500.1 | Wheat | mitochondrion | 42.65 | 35.07 |
| HORVU2Hr1G073040.1 | Barley | cytosol | 42.36 | 35.0 |
| TraesCS2D01G292800.1 | Wheat | mitochondrion | 42.07 | 34.43 |
| CDY67834 | Canola | cytosol | 23.92 | 34.3 |
| CDX98926 | Canola | cytosol | 23.34 | 33.75 |
| CDY55763 | Canola | cytosol, mitochondrion | 21.04 | 32.88 |
| Os04t0412800-01 | Rice | cytosol, plastid | 42.07 | 32.59 |
| Zm00001d003779_P001 | Maize | cytosol | 41.79 | 32.44 |
| CDX81007 | Canola | cytosol, mitochondrion | 20.75 | 32.43 |
| CDY00113 | Canola | cytosol | 12.39 | 32.33 |
| EES10743 | Sorghum | cytosol | 41.79 | 32.15 |
| CDY32696 | Canola | cytosol, plastid | 22.48 | 31.08 |
| CDY32794 | Canola | peroxisome | 22.77 | 30.5 |
| CDY67732 | Canola | plastid | 22.77 | 30.5 |
| CDY70634 | Canola | plastid | 23.34 | 30.34 |
| CDY59509 | Canola | cytosol, plastid | 21.9 | 30.16 |
| CDX74802 | Canola | cytosol, mitochondrion | 20.75 | 29.15 |
| CDX78539 | Canola | cytosol, plastid | 21.61 | 28.63 |
| CDY18861 | Canola | mitochondrion | 20.17 | 28.46 |
| CDY06932 | Canola | plastid | 29.97 | 28.26 |
| CDX70521 | Canola | plastid | 21.61 | 27.99 |
| CDX76039 | Canola | plastid | 28.24 | 27.92 |
| CDY47842 | Canola | cytosol | 28.82 | 27.78 |
| CDY04838 | Canola | mitochondrion | 28.53 | 27.65 |
| CDY04039 | Canola | cytosol | 26.8 | 27.6 |
| CDY14762 | Canola | cytosol, plastid | 28.53 | 27.35 |
| CDY62024 | Canola | cytosol | 27.95 | 26.94 |
| CDY30281 | Canola | cytosol | 29.97 | 26.94 |
| CDY67051 | Canola | cytosol | 29.39 | 26.91 |
| CDY30970 | Canola | plastid | 28.24 | 26.63 |
| CDY70277 | Canola | cytosol | 25.65 | 26.41 |
| CDY06138 | Canola | plastid | 29.97 | 26.33 |
| CDX86410 | Canola | cytosol | 31.12 | 26.28 |
| CDX85224 | Canola | cytosol | 31.12 | 26.09 |
| CDX72074 | Canola | plastid | 29.68 | 25.88 |
| CDY35418 | Canola | plastid | 27.95 | 24.19 |
| CDY22520 | Canola | plastid | 27.95 | 24.19 |
| CDY20015 | Canola | cytosol | 27.95 | 24.01 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | GO:A0A078EV95 | EnsemblPlants:CDY04902 | ProteinID:CDY04902 | ProteinID:CDY04902.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:GSBRNA2T00119623001 | InterPro:Glutaredoxin |
| InterPro:IPR002109 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF79 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI0004EE4EAB | SEG:seg | : | : | : |
Description
BnaAnng00840D
Coordinates
chrLK031958:-:618831..619874
Molecular Weight (calculated)
38943.1 Da
IEP (calculated)
8.790
GRAVY (calculated)
-0.593
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCVSSKPVK KKLVREIRVN NGGDHIVSLT STTYGHLDVQ QRAETSPKGD DFESERRSNA QREDPEIINT WELMEDLEDS TKISPKSRGI FGKSWKTPVK
101: SIVESPKRNG SSKRFRGKEN RGEKQSPNQI LKTPKRGVMR LSFPLKSEEI TQRRRKSFSP MFDPDLVASY ERELSQEKEQ IKMVISPPDP LPEKCPPGGE
201: NSVVVYITTL RGIRKTFEDC NAVRSILDSH EVRYSERDVS MHSVFKEEIR GIMGTKQVKI PAVFVKGRMI GSVEEVVRLE EEGKLGILLE CMPKARVSGC
301: CCGCGGMRFV MCGVCNGSCK VRDAEKKDTV KCLECNENGL VVCPMCS
101: SIVESPKRNG SSKRFRGKEN RGEKQSPNQI LKTPKRGVMR LSFPLKSEEI TQRRRKSFSP MFDPDLVASY ERELSQEKEQ IKMVISPPDP LPEKCPPGGE
201: NSVVVYITTL RGIRKTFEDC NAVRSILDSH EVRYSERDVS MHSVFKEEIR GIMGTKQVKI PAVFVKGRMI GSVEEVVRLE EEGKLGILLE CMPKARVSGC
301: CCGCGGMRFV MCGVCNGSCK VRDAEKKDTV KCLECNENGL VVCPMCS
001: MGCVSSKLGK KKLIREIRVN NGGDHIVSLT STTYGHLDLD ERAETSPKSL EVTKGEVFES EIIPRRSIKR DDPEIINTWE LMEDLEDSMH VSNPQKISPK
101: SRGIFGKSWK TPVKSVVESP KRGSSKRFGG KENNSRGVSP NQILKPKNIL ETPKRGVMRL SFPLKSEESS VTVTQRRKSY SPMFDPDLVA SYERELSQEK
201: EQIKMVISPV VHESRKTEKT ERILEKFPEK CPPGGEHSVV IYITTLRGIR KTFEDCNVVR SILDSHEVRF SERDVSMHSV FKEEIRGIMG TKHVKIPAVF
301: VKGRMVGSVE EVMRLEEEGK LGILLEGIPA ARLGGSCCRG CGGMRFMMCV VCNGSCKVRE EEKKSMVKCL KCNENGLVLC PICS
101: SRGIFGKSWK TPVKSVVESP KRGSSKRFGG KENNSRGVSP NQILKPKNIL ETPKRGVMRL SFPLKSEESS VTVTQRRKSY SPMFDPDLVA SYERELSQEK
201: EQIKMVISPV VHESRKTEKT ERILEKFPEK CPPGGEHSVV IYITTLRGIR KTFEDCNVVR SILDSHEVRF SERDVSMHSV FKEEIRGIMG TKHVKIPAVF
301: VKGRMVGSVE EVMRLEEEGK LGILLEGIPA ARLGGSCCRG CGGMRFMMCV VCNGSCKVRE EEKKSMVKCL KCNENGLVLC PICS
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9LZC2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.