CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007299.1-P	Field mustard	plastid	99.49	99.49
CDX72074	Canola	plastid	95.95	95.23
CDX76039	Canola	plastid	71.39	80.34
CDY30970	Canola	plastid	73.92	79.35
AT3G57070.1	Thale cress	plastid	81.01	76.74
CDY06932	Canola	plastid	56.96	61.14
CDY14762	Canola	cytosol, plastid	55.44	60.5
CDY35418	Canola	plastid	60.51	59.6
CDY22520	Canola	plastid	59.49	58.6
VIT_08s0007g05530.t01	Wine grape	cytosol	34.43	55.51
Solyc04g039900.1.1	Tomato	cytosol, extracellular, nucleus	34.43	50.0
KRG95123	Soybean	plastid	51.14	47.64
KRH66801	Soybean	plastid	42.03	44.27
PGSC0003DMT400007648	Potato	cytosol	43.04	42.93
Solyc10g079560.1.1	Tomato	plastid	46.58	42.4
PGSC0003DMT400020985	Potato	cytosol, plastid	46.58	42.4
CDY11274	Canola	cytosol	11.65	42.2
CDY70634	Canola	plastid	28.1	41.57
CDX74801	Canola	cytosol	17.47	41.32
CDY67732	Canola	plastid	27.09	41.31
CDX80893	Canola	cytosol	11.39	41.28
CDX78539	Canola	cytosol, plastid	26.33	39.69
CDY14169	Canola	cytosol	24.3	39.18
CDX70521	Canola	plastid	26.33	38.81
CDY00113	Canola	cytosol	12.66	37.59
CDX93821	Canola	cytosol	23.8	36.15
CDY01245	Canola	cytosol	23.29	35.52
CDX90765	Canola	cytosol	22.28	32.96
CDY59509	Canola	cytosol, plastid	21.01	32.94
CDY05109	Canola	cytosol	22.03	32.83
CDY32696	Canola	cytosol, plastid	20.51	32.27
CDY70277	Canola	cytosol	27.09	31.75
CDY67051	Canola	cytosol	30.13	31.4
CDY30281	Canola	cytosol	30.63	31.35
CDY32794	Canola	peroxisome	20.51	31.27
CDX74802	Canola	cytosol, mitochondrion	19.49	31.17
CDY04039	Canola	cytosol	26.33	30.86
CDX98926	Canola	cytosol	18.48	30.42
CDY67834	Canola	cytosol	18.48	30.17
CDY18861	Canola	mitochondrion	18.73	30.08
CDY04902	Canola	nucleus	26.33	29.97
CDY20015	Canola	cytosol	30.38	29.7
CDX86410	Canola	cytosol	30.63	29.44
CDX85224	Canola	cytosol	30.63	29.23
CDY55763	Canola	cytosol, mitochondrion	15.19	27.03
CDX81007	Canola	cytosol, mitochondrion	14.94	26.58
CDY62024	Canola	cytosol	21.27	23.33
CDY47842	Canola	cytosol	21.01	23.06
CDY04838	Canola	mitochondrion	18.99	20.95
CDY11275	Canola	nucleus	9.37	18.69
CDX80894	Canola	nucleus	9.11	18.37

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:A0A078F315	EnsemblPlants:CDY06138	ProteinID:CDY06138	ProteinID:CDY06138.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00122022001	InterPro:Glutaredoxin
InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF70	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EEBB7A	SEG:seg	:	:	:

Description

BnaA09g36420D

Coordinates

chrLK031967:-:975612..977252

Molecular Weight (calculated)

43332.1 Da

IEP (calculated)

6.501

GRAVY (calculated)

-0.506

Length

395 amino acids

Sequence
(BLAST)

001: MGSSTSKTSS SASSTSVSSS FVAASDSPSP AIHKAFSFPT PLVHHPPARK GDTHHLVSLT STSYGSLLLK SSSDQETPPR ISISDKNTTD PVSRDSFSPD
101: SVINTWELMD GLDDEFEFEI AKPGKLGSGQ DSDLCPKPDP NRNGSALKLD ESYEFVRTGQ DEEDWVPLSY KPKQPLWKHL SEESFLSGLD PSIVSSYKKA
201: LSSKQLTNHS VDTRKPLTAT KSLSFITSEP KSVCAKPRLQ GAEDKIVLYF TTLRGIRKTY EDCCCVRMIL KGLQVAVDER DISMDSKYRK ELQSLLGAGE
301: KPKPVCLPQV FIRGSHIGGV EEIMKLNDSG ELAEMLKDFP ACECLGTCRS CGDARFVPCS NCDGSTKVFG EEEERFKRCP KCNENGLVRC RQCSV

Best Arabidopsis Sequence Match ( AT3G57070.1 )
(BLAST)

001: MGSSASKTAS SVSSASSSSA FSPPPTKFSS DSSSPAVQRA FSFPTPLVHH PPARKGDSHH LVSLTSTSYG SLLLLDLDGS KNSSSDQQTL PRISISGKNT
101: PDPVSPDSVI NTWELMDGLD DEFEFEIPKP GKRLNSDFCS KPDPNRNVSL NGSSLKLDES YEIVRIEEDD GDWVPLTYKP KQPLWKHLSE ESFLSDLDPS
201: IVSSYKKALS SKLLSNHSNT RNPHRPTKSL SCSPSSNPSI LISEEPKSVS SSQLISSPAK PRLPGTEDKI VLYFTTLRGI RKTYEDCCCV RAILRGVQVS
301: VDERDISMDS KYRKELQSVL GAAEKPVCLP QVFIRGTHIG GVEEIMQLND GGELAEMLKD FPACERLGTC RSCGDARFVP CTNCDGSTKV FEEQDERFKR
401: CPKCNENGLV RCRVCCL

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9M1J3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.