Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93821 | Canola | cytosol | 96.53 | 96.15 |
| Bra023284.1-P | Field mustard | cytosol | 95.37 | 82.33 |
| AT1G32760.1 | Thale cress | plastid | 77.61 | 64.01 |
| KRH41800 | Soybean | cytosol | 62.55 | 60.0 |
| CDY05109 | Canola | cytosol | 61.39 | 60.0 |
| CDX90765 | Canola | cytosol | 61.78 | 59.93 |
| CDY11274 | Canola | cytosol | 22.39 | 53.21 |
| CDX80893 | Canola | cytosol | 22.01 | 52.29 |
| VIT_02s0025g02700.t01 | Wine grape | cytosol | 61.78 | 51.78 |
| Solyc08g083270.1.1 | Tomato | cytosol | 57.53 | 45.57 |
| PGSC0003DMT400031889 | Potato | plastid | 52.9 | 43.77 |
| TraesCS1A01G103100.1 | Wheat | cytosol | 49.81 | 42.43 |
| CDY14169 | Canola | cytosol | 39.77 | 42.04 |
| TraesCS1D01G095500.1 | Wheat | cytosol | 49.81 | 42.02 |
| TraesCS1B01G114500.1 | Wheat | cytosol | 49.81 | 41.75 |
| Zm00001d054094_P001 | Maize | cytosol | 50.19 | 41.67 |
| HORVU1Hr1G021100.2 | Barley | cytosol | 49.42 | 41.16 |
| KXG29248 | Sorghum | cytosol | 49.42 | 38.91 |
| CDX74801 | Canola | cytosol | 23.55 | 36.53 |
| CDY00113 | Canola | cytosol | 17.37 | 33.83 |
| CDY67834 | Canola | cytosol | 31.27 | 33.47 |
| CDX98926 | Canola | cytosol | 30.89 | 33.33 |
| CDY04902 | Canola | nucleus | 42.08 | 31.41 |
| Os02t0102000-00 | Rice | cytosol | 39.0 | 31.37 |
| CDX81007 | Canola | cytosol, mitochondrion | 26.25 | 30.63 |
| CDY55763 | Canola | cytosol, mitochondrion | 26.25 | 30.63 |
| CDY32794 | Canola | peroxisome | 28.57 | 28.57 |
| CDY32696 | Canola | cytosol, plastid | 27.41 | 28.29 |
| CDY67732 | Canola | plastid | 28.19 | 28.19 |
| CDY59509 | Canola | cytosol, plastid | 27.41 | 28.17 |
| CDY70634 | Canola | plastid | 28.57 | 27.72 |
| CDX78539 | Canola | cytosol, plastid | 27.8 | 27.48 |
| CDY47842 | Canola | cytosol | 37.45 | 26.94 |
| CDX70521 | Canola | plastid | 27.8 | 26.87 |
| CDY04039 | Canola | cytosol | 34.36 | 26.41 |
| CDY62024 | Canola | cytosol | 36.68 | 26.39 |
| CDY18861 | Canola | mitochondrion | 24.71 | 26.02 |
| CDX74802 | Canola | cytosol, mitochondrion | 24.71 | 25.91 |
| CDY70277 | Canola | cytosol | 33.59 | 25.82 |
| CDY04838 | Canola | mitochondrion | 35.14 | 25.42 |
| CDX76039 | Canola | plastid | 33.98 | 25.07 |
| CDY67051 | Canola | cytosol | 35.91 | 24.54 |
| CDY30281 | Canola | cytosol | 36.29 | 24.35 |
| CDY30970 | Canola | plastid | 34.36 | 24.18 |
| CDY06932 | Canola | plastid | 34.36 | 24.18 |
| CDY14762 | Canola | cytosol, plastid | 33.2 | 23.76 |
| CDY06138 | Canola | plastid | 35.52 | 23.29 |
| CDX72074 | Canola | plastid | 35.14 | 22.86 |
| CDX85224 | Canola | cytosol | 36.29 | 22.71 |
| CDX86410 | Canola | cytosol | 35.91 | 22.63 |
| CDY20015 | Canola | cytosol | 35.14 | 22.52 |
| CDY22520 | Canola | plastid | 34.36 | 22.19 |
| CDY35418 | Canola | plastid | 34.36 | 22.19 |
| CDY11275 | Canola | nucleus | 12.74 | 16.67 |
| CDX80894 | Canola | nucleus | 12.36 | 16.33 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | GO:A0A078EGM7 | EnsemblPlants:CDY01245 | ProteinID:CDY01245 | ProteinID:CDY01245.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:GSBRNA2T00111396001 | InterPro:Glutaredoxin |
| InterPro:IPR002109 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF79 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI0004EE13A2 | SEG:seg | : | : | : |
Description
BnaC05g24870D
Coordinates
chrLK031925:-:592553..593464
Molecular Weight (calculated)
27946.6 Da
IEP (calculated)
4.962
GRAVY (calculated)
-0.034
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCVSSNLLN QSDDFSQLAG CHHHFVQLTS STYGLLNLDP PPPPSSSVIS APATPMTPPE RFTFVGKEPI TVKSEPEVIN FWELMSGLDA DTCRFSPLPK
101: LCPPGDGGDN RVVIYTTSLR GVRRTFDACN AVRAAIESFG VVICERDISM DRGFREELTS LMSGEAVLPP RVFVKGRYIG GVDEVMNLVE EGMLRDLLSG
201: IPRRKDRGGG CYGCGGLSFL PCSECNGSCK VVEGWGSDVV VVRCNKCNEN GLVLCPICS
101: LCPPGDGGDN RVVIYTTSLR GVRRTFDACN AVRAAIESFG VVICERDISM DRGFREELTS LMSGEAVLPP RVFVKGRYIG GVDEVMNLVE EGMLRDLLSG
201: IPRRKDRGGG CYGCGGLSFL PCSECNGSCK VVEGWGSDVV VVRCNKCNEN GLVLCPICS
001: MGGCVSSNLL TPTDDSSFSH LTSSSLSQHF VKLTSTTYGL LNLDSSSPSP PSPSSSSSAK SVITPMTPPE RFTINGKEAA MMMVKSEPTT EVINFWELMS
101: GLDGDTCRFS PIPVKCNGFS GGLKKENSDP NLKNPNDYEV LKPLDPKLAE ESERLCDGGE NRVVIYTTSL RGVRRTFEAC NAVRAAIESF GVVVCERDVS
201: MDRGFREELS NLMAVESTAA VLPPRVFVKG KYIGGAEEVM RLVEEGLLGE LLKEIPRKKD RCGGGCGGCG GLAFLPCSGC NGSCKVVEGW GNDAVVVKCK
301: ECNENGLVRC PICS
101: GLDGDTCRFS PIPVKCNGFS GGLKKENSDP NLKNPNDYEV LKPLDPKLAE ESERLCDGGE NRVVIYTTSL RGVRRTFEAC NAVRAAIESF GVVVCERDVS
201: MDRGFREELS NLMAVESTAA VLPPRVFVKG KYIGGAEEVM RLVEEGLLGE LLKEIPRKKD RCGGGCGGCG GLAFLPCSGC NGSCKVVEGW GNDAVVVKCK
301: ECNENGLVRC PICS
Arabidopsis Description
At1g32760 [Source:UniProtKB/TrEMBL;Acc:Q9LPI8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.