Factsheet for PGSC0003DMT400031889

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g083270.1.1	Tomato	cytosol	92.65	88.69
VIT_02s0025g02700.t01	Wine grape	cytosol	62.94	63.75
KRH41800	Soybean	cytosol	50.16	58.15
CDX93821	Canola	cytosol	44.09	53.08
CDY01245	Canola	cytosol	43.77	52.9
CDX90765	Canola	cytosol	44.73	52.43
CDY05109	Canola	cytosol	44.09	52.08
Bra000716.1-P	Field mustard	cytosol	49.84	50.32
Bra023284.1-P	Field mustard	cytosol	46.01	48.0
AT4G10630.1	Thale cress	cytosol	50.8	47.6
AT1G32760.1	Thale cress	plastid	46.01	45.86
TraesCS1A01G103100.1	Wheat	cytosol	40.58	41.78
TraesCS1D01G095500.1	Wheat	cytosol	40.89	41.69
HORVU1Hr1G021100.2	Barley	cytosol	41.21	41.48
TraesCS1B01G114500.1	Wheat	cytosol	40.89	41.42
Zm00001d054094_P001	Maize	cytosol	38.02	38.14
KXG29248	Sorghum	cytosol	38.34	36.47
PGSC0003DMT400054970	Potato	cytosol, mitochondrion	24.28	31.15
PGSC0003DMT400047487	Potato	cytosol	25.88	30.68
PGSC0003DMT400078241	Potato	cytosol, plastid	23.32	30.42
PGSC0003DMT400078242	Potato	cytosol, plastid	24.28	29.92
PGSC0003DMT400023120	Potato	cytosol	37.38	29.25
Os02t0102000-00	Rice	cytosol	30.03	29.19
PGSC0003DMT400017853	Potato	cytosol	28.75	27.86
PGSC0003DMT400015465	Potato	cytosol	23.0	26.28
PGSC0003DMT400005022	Potato	cytosol	29.71	25.34
PGSC0003DMT400056766	Potato	cytosol	31.95	25.19
PGSC0003DMT400007648	Potato	cytosol	31.63	25.0
PGSC0003DMT400031969	Potato	cytosol	30.35	24.3
PGSC0003DMT400003335	Potato	cytosol	30.99	23.15
PGSC0003DMT400020985	Potato	cytosol, plastid	31.31	22.58

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109
UniProt:M1AWF4	PFAM:PF00462	EnsemblPlantsGene:PGSC0003DMG400012231	PGSC:PGSC0003DMG400012231	EnsemblPlants:PGSC0003DMT400031889	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF79	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002954411	SEG:seg

Description

Electron transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400012231]

Coordinates

chr8:+:56733863..56738023

Molecular Weight (calculated)

33999.8 Da

IEP (calculated)

6.279

GRAVY (calculated)

-0.255

Length

313 amino acids

Sequence
(BLAST)

001: MGGSAAGFSH HIVSLTSTTY GLLTLDPPST PPPTTTTVPP TPTPPPRHTL GSLFPSPLSE PRILKSDIIN SWELMAGLDS TSTTPISDSF RFPSLRKSTP
101: DSSFRFLNKS SPNKENSSPN IPSFTDALDK ADIFNPTRLP SASVLDGFEK LCPPNGEGKI VIYTTTLRGV RKTFEACNVV RSAIEGLGVL YSERDISMDR
201: GFREELKELM KGKESTELIP PRVFFKGRYI GGAEDVMRIV EEGNFGDLLQ GLPKMKAGSV CEGCGGVRFM PCFTCNGSCK MVKEDMEQNE GRAVVVRCTE
301: CNENGLVLCP ICC

Best Arabidopsis Sequence Match ( AT4G10630.1 )
(BLAST)

001: MGCVSSNLLN HDEDFSQIGG GSSAFGHHIV KLTSTTYGLL TLDPPPPPSP PMTPPEKFTV DTKSKSIWSE PRVIKSEPEI INSWELMSGL DGESFRFTPL
101: PKTPVKYKVF GGENKENSDP SRRNPRKNLN DEVLKPLDLN REDSDSNSRS PRKSFKPLDL KLDEKFERIC PPGGENRVVM YTTSLRGVRQ TFEACNAVRA
201: AVESFGVVVC ERDVSMDRRF REELVSLMAK RVGDEGVAAL PPRVFVKGRY IGGGEEVLRL VEEGSFGELI SGIPRKKAGG CESGACDGCG GLFFLPCFRC
301: NGSCKMVKGW GSASVVVRCN ECNENGLVPC PICS

Arabidopsis Description

F3H7.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZSB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.