Factsheet for VIT_02s0025g02700.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41800	Soybean	cytosol	58.58	67.04
PGSC0003DMT400031889	Potato	plastid	63.75	62.94
Solyc08g083270.1.1	Tomato	cytosol	66.02	62.39
CDY01245	Canola	cytosol	51.78	61.78
CDX93821	Canola	cytosol	51.78	61.54
CDY05109	Canola	cytosol	50.49	58.87
CDX90765	Canola	cytosol	50.81	58.8
Bra000716.1-P	Field mustard	cytosol	57.61	57.42
Bra023284.1-P	Field mustard	cytosol	54.37	56.0
AT4G10630.1	Thale cress	cytosol	59.22	54.79
AT1G32760.1	Thale cress	plastid	53.4	52.55
VIT_08s0032g01030.t01	Wine grape	cytosol	27.51	46.45
TraesCS1D01G095500.1	Wheat	cytosol	44.66	44.95
TraesCS1A01G103100.1	Wheat	cytosol	44.01	44.74
TraesCS1B01G114500.1	Wheat	cytosol	44.34	44.34
HORVU1Hr1G021100.2	Barley	cytosol	44.01	43.73
Zm00001d054094_P001	Maize	cytosol	44.01	43.59
KXG29248	Sorghum	cytosol	43.69	41.03
VIT_08s0007g05530.t01	Wine grape	cytosol	27.51	34.69
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	26.54	33.33
VIT_08s0007g03220.t01	Wine grape	cytosol	41.75	32.41
Os02t0102000-00	Rice	cytosol	33.33	31.99
VIT_13s0019g00340.t01	Wine grape	plastid	24.92	28.73
VIT_13s0067g01650.t01	Wine grape	plastid	25.89	27.21
VIT_13s0073g00520.t01	Wine grape	cytosol	32.04	26.33
VIT_02s0025g01710.t01	Wine grape	cytosol	30.74	25.13
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	35.6	24.44

Protein Annotations

EntrezGene:100241093	wikigene:100241093	Gene3D:3.40.30.10	MapMan:35.1	EMBL:AM453420	ProteinID:CAN76670
ProteinID:CAN76670.1	ProteinID:CCB58304	ProteinID:CCB58304.1	UniProt:F6HU81	EMBL:FN596251	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	EntrezGene:LOC100241093	wikigene:LOC100241093	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF79	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002109BA9
ArrayExpress:VIT_02s0025g02700	EnsemblPlantsGene:VIT_02s0025g02700	EnsemblPlants:VIT_02s0025g02700.t01	RefSeq:XP_002272456	RefSeq:XP_002272456.1	SEG:seg

Description

No Description!

Coordinates

chr2:+:2339995..2341079

Molecular Weight (calculated)

33661.8 Da

IEP (calculated)

6.143

GRAVY (calculated)

-0.202

Length

309 amino acids

Sequence
(BLAST)

001: MGCVSSTLLN HEEELGQLSG STLGHHIVSL TSTTYGLLNL DPPPQPTHPP TLTPRFTLGS VFPSPLSEPR GIRSEPEVIN SWELMAGLDA DSFRFPPLPL
101: APSKPKALAI KETNINKENS NPNRPNCGDE LRVLKPLNDS VLRQCLALLD GFERLCPPNG ENRVVVYTTT LRGVRKTFED CNAVRAAIEG LGVSLCERDI
201: SMDRGFKEEL RELMKGKDSC QMVPPRVFVK GRYVGGAEEV LKIVEEGCLG ELLQGLPKIR AGEVCEGCGG VRFLPCFQCN GSCKMQGRSV VVRCPDCNEN
301: GLVLCPICS

Best Arabidopsis Sequence Match ( AT4G10630.1 )
(BLAST)

001: MGCVSSNLLN HDEDFSQIGG GSSAFGHHIV KLTSTTYGLL TLDPPPPPSP PMTPPEKFTV DTKSKSIWSE PRVIKSEPEI INSWELMSGL DGESFRFTPL
101: PKTPVKYKVF GGENKENSDP SRRNPRKNLN DEVLKPLDLN REDSDSNSRS PRKSFKPLDL KLDEKFERIC PPGGENRVVM YTTSLRGVRQ TFEACNAVRA
201: AVESFGVVVC ERDVSMDRRF REELVSLMAK RVGDEGVAAL PPRVFVKGRY IGGGEEVLRL VEEGSFGELI SGIPRKKAGG CESGACDGCG GLFFLPCFRC
301: NGSCKMVKGW GSASVVVRCN ECNENGLVPC PICS

Arabidopsis Description

F3H7.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZSB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.