CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d054094_P001	Maize	cytosol	81.76	86.22
TraesCS1D01G095500.1	Wheat	cytosol	60.79	65.15
TraesCS1A01G103100.1	Wheat	cytosol	59.88	64.8
TraesCS1B01G114500.1	Wheat	cytosol	60.79	64.72
HORVU1Hr1G021100.2	Barley	cytosol	61.09	64.63
CDX93821	Canola	cytosol	39.21	49.62
CDY01245	Canola	cytosol	38.91	49.42
CDX90765	Canola	cytosol	38.6	47.57
CDY05109	Canola	cytosol	38.3	47.55
KRH41800	Soybean	cytosol	38.6	47.04
Os02t0102000-00	Rice	cytosol	43.47	44.41
VIT_02s0025g02700.t01	Wine grape	cytosol	41.03	43.69
Bra023284.1-P	Field mustard	cytosol	38.91	42.67
Bra000716.1-P	Field mustard	cytosol	40.12	42.58
AT4G10630.1	Thale cress	cytosol	41.34	40.72
AT1G32760.1	Thale cress	plastid	38.6	40.45
EER94843	Sorghum	cytosol	24.62	39.9
Solyc08g083270.1.1	Tomato	cytosol	38.91	39.14
PGSC0003DMT400031889	Potato	plastid	36.47	38.34
KXG36862	Sorghum	cytosol	24.62	38.03
EER95886	Sorghum	mitochondrion	29.18	35.04
EES10743	Sorghum	cytosol	44.38	32.37
EER95421	Sorghum	mitochondrion, plastid	30.7	30.06
EES18035	Sorghum	mitochondrion	21.88	30.0
EES05526	Sorghum	mitochondrion	31.61	27.37
EES19677	Sorghum	plastid	21.88	27.27
KXG33640	Sorghum	mitochondrion	20.97	26.04
EER91159	Sorghum	mitochondrion	26.75	24.72
EER88108	Sorghum	plastid	32.22	23.25
OQU81447	Sorghum	plastid	12.46	21.69
KXG31460	Sorghum	cytosol	25.53	21.0
EES14625	Sorghum	cytosol, plastid	25.53	20.74
OQU82428	Sorghum	cytosol, plastid	30.4	20.12

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.2	UniProt:A0A194YLZ8	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin
InterPro:IPR002109	EnsemblPlants:KXG29248	ProteinID:KXG29248	ProteinID:KXG29248.1	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF44	EnsemblPlantsGene:SORBI_3004G001800	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0007F2B3BB
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:148551..150124

Molecular Weight (calculated)

34874.8 Da

IEP (calculated)

8.928

GRAVY (calculated)

-0.239

Length

329 amino acids

Sequence
(BLAST)

001: MGCVSSSLLE GDGAEDDRRR IISHHHIVSL TSSTYGILTS PRAYSSSSSS SSFTAKPVAL GPEPFAPPPT TRCAPPPPPP PPLPPPARQQ APPPPKPESQ
101: PQAEVINSWE LMAGLVDPST PAKPTTPSSG RDHQRRRRIP LRAIDGNSSA FKASPCSSSP SAVVLYTTSL RGVRATFEAC NAVRAVLQAH GVAFRERDVS
201: MDRGFRDELR SKVCGARAPA LAAMLPRLFV RGRHVGGAED VLRLDEEGLL APLLEGLPRA RGGGAYCCDG CGGMRFLPCF DCSGSRKLAV TLPVPAASTA
301: SCSYRRRKVV VVRCGECNEN GLVLCPICS

Best Arabidopsis Sequence Match ( AT4G10630.1 )
(BLAST)

001: MGCVSSNLLN HDEDFSQIGG GSSAFGHHIV KLTSTTYGLL TLDPPPPPSP PMTPPEKFTV DTKSKSIWSE PRVIKSEPEI INSWELMSGL DGESFRFTPL
101: PKTPVKYKVF GGENKENSDP SRRNPRKNLN DEVLKPLDLN REDSDSNSRS PRKSFKPLDL KLDEKFERIC PPGGENRVVM YTTSLRGVRQ TFEACNAVRA
201: AVESFGVVVC ERDVSMDRRF REELVSLMAK RVGDEGVAAL PPRVFVKGRY IGGGEEVLRL VEEGSFGELI SGIPRKKAGG CESGACDGCG GLFFLPCFRC
301: NGSCKMVKGW GSASVVVRCN ECNENGLVPC PICS

Arabidopsis Description

F3H7.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZSB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.