CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 2
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052252_P001	Maize	mitochondrion	86.05	88.86
Zm00001d018058_P001	Maize	plastid	82.37	83.02
Os02t0748800-00	Rice	cytosol, mitochondrion	75.79	78.05
TraesCS6D01G285000.1	Wheat	mitochondrion	72.11	72.49
TraesCS6B01G334000.1	Wheat	mitochondrion	72.37	71.99
TraesCS6A01G305800.1	Wheat	mitochondrion	72.63	71.69
HORVU0Hr1G017160.1	Barley	mitochondrion	71.58	71.58
EER88108	Sorghum	plastid	58.68	48.9
CDY00113	Canola	cytosol	16.84	48.12
EER94843	Sorghum	cytosol	21.58	40.39
EER95421	Sorghum	mitochondrion, plastid	35.26	39.88
CDY04039	Canola	cytosol	32.11	36.2
Bra033062.1-P	Field mustard	cytosol	32.11	36.2
KXG36862	Sorghum	cytosol	20.26	36.15
CDY70277	Canola	cytosol	31.84	35.91
PGSC0003DMT400017853	Potato	cytosol	30.26	35.6
CDY67051	Canola	cytosol	34.74	34.83
PGSC0003DMT400056766	Potato	cytosol	36.32	34.76
CDY30281	Canola	cytosol	35.26	34.72
AT5G39865.1	Thale cress	cytosol, mitochondrion	34.74	33.85
KXG33640	Sorghum	mitochondrion	23.42	33.58
Bra025357.1-P	Field mustard	cytosol	36.32	33.58
CDX86410	Canola	cytosol	36.32	33.58
CDY20015	Canola	cytosol	35.53	33.42
EES18035	Sorghum	mitochondrion	21.05	33.33
EES19677	Sorghum	plastid	23.16	33.33
CDX85224	Canola	cytosol	36.32	33.33
PGSC0003DMT400003335	Potato	cytosol	36.58	33.17
Bra025638.1-P	Field mustard	cytosol	35.79	33.17
EES14625	Sorghum	cytosol, plastid	35.26	33.09
OQU82428	Sorghum	cytosol, plastid	43.16	33.0
Solyc02g087850.1.1	Tomato	cytosol, plastid	36.32	32.94
AT3G28850.1	Thale cress	cytosol	36.58	32.48
Bra039044.1-P	Field mustard	cytosol	36.05	32.46
Solyc02g067400.1.1	Tomato	cytosol	23.95	32.04
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	37.63	31.78
EER95886	Sorghum	mitochondrion	22.89	31.75
KXG29248	Sorghum	cytosol	27.37	31.61
KRH40113	Soybean	cytosol, mitochondrion	37.37	31.0
KRH01158	Soybean	cytosol	37.11	30.39
KRG93517	Soybean	cytosol	34.47	29.98
OQU81447	Sorghum	plastid	13.68	27.51
EER91159	Sorghum	mitochondrion	25.26	26.97
EES10743	Sorghum	cytosol	30.0	25.28
KXG31460	Sorghum	cytosol	21.05	20.0

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:8066430	UniProt:C5XYS2	EnsemblPlants:EES05526	ProteinID:EES05526
ProteinID:EES05526.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF183	EnsemblPlantsGene:SORBI_3004G236500	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0001A854AE	RefSeq:XP_002452550.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:58436221..58439706

Molecular Weight (calculated)

40896.7 Da

IEP (calculated)

7.128

GRAVY (calculated)

-0.584

Length

380 amino acids

Sequence
(BLAST)

001: MGCTGSRHAL RGGVRGGGRS PHARSRSGAV HHTVALKSST LGSLSLDRDE EEMMKWRDDG GVVGAAKTPP MPLKPQLMRR QKQVPGSPAK TPQVREPEVI
101: NVWELMDGLD DKDEDGEERR EKSAPGSPEF DPDVIAAFRK ALDEIPPPPD DPGNEECIKK PGDGPGGGGD EVGVKKREIQ RFPGIVRARV SAFQQRIDAK
201: LAKLAPPQPQ PPALPPPPDS ARKVVLYLTS LRGIRKTYED CWSAKSILQS YGVRVDERDL SMHSGFKDEL HAALGSTSAG SRLPQVFADG RHLGGAEEIR
301: RMHEAGELSK ALEACEMAPP PSSGGKGIAL EACSGCGGVR FVPCEECSGS CKVFLEEVGT FRRCPECNEN GLVRCPLCSL

Best Arabidopsis Sequence Match ( AT5G39865.1 )
(BLAST)

001: MGCASSKNRN RCRNCKGGLS PVIVPRSYSM HVHHPAQHTG DSYHTVALTS STIGSLSLCD SSLRHFHKHL EDSFYKQRVS DQMGEETLIS GNGFLHGDEE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE

Arabidopsis Description

Uncharacterized protein At5g39865 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE8]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.