CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER99396

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58530.1	EER99396	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010594_P001	Maize	plastid	77.65	82.33
Zm00001d038445_P001	Maize	cytosol	72.73	69.31
KXG33640	Sorghum	mitochondrion	66.29	66.04
GSMUA_Achr5P29410_001	Banana	mitochondrion	52.27	59.74
OQU81447	Sorghum	plastid	41.29	57.67
GSMUA_Achr5P14280_001	Banana	plastid	48.11	55.46
GSMUA_Achr4P18760_001	Banana	plastid	46.97	52.54
GSMUA_Achr6P32840_001	Banana	cytosol	46.21	52.36
EES18035	Sorghum	mitochondrion	46.59	51.25
CDX74801	Canola	cytosol	30.68	48.5
GSMUA_Achr6P23380_001	Banana	mitochondrion	42.8	48.09
GSMUA_Achr7P18270_001	Banana	mitochondrion	47.35	48.08
Bra002640.1-P	Field mustard	cytosol	20.08	44.92
EER94843	Sorghum	cytosol	34.09	44.34
KRG97693	Soybean	plastid	38.26	44.1
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	40.53	43.5
KRH14919	Soybean	plastid	39.77	43.39
KRH31178	Soybean	plastid	37.12	42.79
KRH30192	Soybean	plastid	37.12	42.42
KRG98239	Soybean	plastid	37.88	42.37
PGSC0003DMT400078242	Potato	cytosol, plastid	39.02	40.55
Solyc06g082180.1.1	Tomato	cytosol, plastid	39.02	40.55
PGSC0003DMT400078241	Potato	cytosol, plastid	36.74	40.42
Bra020363.1-P	Field mustard	cytosol, plastid	38.26	40.08
CDY59509	Canola	cytosol, plastid	38.26	40.08
VIT_13s0067g01650.t01	Wine grape	plastid	44.32	39.8
CDY32696	Canola	cytosol, plastid	37.12	39.04
KXG36862	Sorghum	cytosol	31.06	38.5
CDY32794	Canola	peroxisome	37.12	37.84
CDY18861	Canola	mitochondrion	34.47	36.99
Bra004972.1-P	Field mustard	mitochondrion	34.47	36.84
CDX74802	Canola	cytosol, mitochondrion	34.09	36.44
AT5G58530.1	Thale cress	cytosol, plastid	37.12	35.9
KRH72724	Soybean	plastid	37.5	35.23
Bra004971.1-P	Field mustard	plastid	33.71	35.18
KRH73271	Soybean	plastid	39.39	34.55
KRH17081	Soybean	plastid	37.5	32.78
EER95886	Sorghum	mitochondrion	27.27	26.28
EER95421	Sorghum	mitochondrion, plastid	32.95	25.89
EES05526	Sorghum	mitochondrion	33.33	23.16
EER91159	Sorghum	mitochondrion	31.06	23.03
EES14625	Sorghum	cytosol, plastid	35.23	22.96
Solyc06g082170.2.1	Tomato	cytosol, plastid	35.61	22.65
KXG29248	Sorghum	cytosol	27.27	21.88
EER88108	Sorghum	plastid	36.36	21.05
OQU82428	Sorghum	cytosol, plastid	34.47	18.31
EES10743	Sorghum	cytosol	29.55	17.29
KXG31460	Sorghum	cytosol	25.76	17.0

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:8061798	UniProt:C5YZF0	EnsemblPlants:EES19677	ProteinID:EES19677
ProteinID:EES19677.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF95	EnsemblPlantsGene:SORBI_3009G169900	SUPFAM:SSF52833	unigene:Sbi.10744
InterPro:Thioredoxin-like_sf	UniParc:UPI0001A88E7B	RefSeq:XP_002441247.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:52557525..52559334

Molecular Weight (calculated)

27961.7 Da

IEP (calculated)

9.991

GRAVY (calculated)

-0.125

Length

264 amino acids

Sequence
(BLAST)

001: MWPSWVKTRS SDPAAASTST ALVPAAGASP RLSIPNPSLK DLRSLLAPDS AAAALPSAVS PSPRVFHRIR VAASALRVLR TLQHSPSSPP AAGKELAPGG
101: GRVVLYFTSL RVVRGTYEDC RAVRAILRGL RAAVDERDLS MDPGYLPELA ALLPHPHAQQ QRRHRVALPQ VFVGGRYLGG AEEVRRLHES GELRRIVAPA
201: PANPAFPGNC ARCGGERYVL CGACDGSHKR YSLKGGGGFR ACAECNENGL VRCPACCCIP VHAA

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.