Factsheet for GSMUA_Achr5P29410_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 6
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P33210_001
GSMUA_Achr7P00390_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58530.1	GSMUA_Achr4P33210_001	AT1G30860.1	21798944
AT5G58530.1	GSMUA_Achr7P00390_001	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P18760_001	Banana	plastid	78.79	77.12
GSMUA_Achr5P14280_001	Banana	plastid	76.19	76.86
Zm00001d012471_P001	Maize	cytosol, plastid	29.0	58.26
TraesCS3A01G349200.1	Wheat	plastid	59.31	55.24
Os01t0829400-01	Rice	mitochondrion	60.61	54.9
TraesCS3D01G343100.1	Wheat	plastid	59.31	54.58
TraesCS3B01G381400.1	Wheat	mitochondrion, plastid	58.01	53.82
Zm00001d010594_P001	Maize	plastid	57.14	53.01
HORVU3Hr1G087930.1	Barley	plastid	56.71	52.82
GSMUA_Achr6P32840_001	Banana	cytosol	52.81	52.36
EES19677	Sorghum	plastid	59.74	52.27
KXG33640	Sorghum	mitochondrion	59.74	52.08
Os05t0471350-00	Rice	mitochondrion, plastid	57.58	51.75
EES18035	Sorghum	mitochondrion	51.08	49.17
Zm00001d038018_P001	Maize	mitochondrion	50.65	48.95
GSMUA_Achr6P23380_001	Banana	mitochondrion	48.92	48.09
GSMUA_Achr7P18270_001	Banana	mitochondrion	53.68	47.69
GSMUA_Achr8P22080_001	Banana	cytosol	40.26	47.21
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	50.22	47.15
TraesCS1A01G222600.1	Wheat	mitochondrion	46.75	46.75
Zm00001d043006_P001	Maize	plastid	58.44	46.71
Zm00001d038445_P001	Maize	cytosol	55.41	46.21
Zm00001d010509_P001	Maize	mitochondrion	49.35	46.15
CDX74801	Canola	cytosol	33.33	46.11
TraesCS1B01G235900.1	Wheat	mitochondrion	45.89	45.89
KRH30192	Soybean	plastid	45.89	45.89
Bra002640.1-P	Field mustard	cytosol	23.38	45.76
TraesCS1D01G224200.1	Wheat	mitochondrion	45.45	45.45
Os10t0343900-01	Rice	cytosol	25.97	45.45
HORVU1Hr1G060210.1	Barley	mitochondrion, plastid	47.19	45.23
KRG98239	Soybean	plastid	45.45	44.49
KRH14919	Soybean	plastid	46.32	44.21
GSMUA_Achr8P09670_001	Banana	cytosol	38.53	43.41
HORVU1Hr1G070570.1	Barley	plastid	48.92	43.3
PGSC0003DMT400078241	Potato	cytosol, plastid	44.59	42.92
Solyc06g082180.1.1	Tomato	cytosol, plastid	47.19	42.91
PGSC0003DMT400078242	Potato	cytosol, plastid	47.19	42.91
KRH31178	Soybean	plastid	42.42	42.79
TraesCS1D01G294800.1	Wheat	plastid	46.32	42.63
TraesCS1B01G305600.1	Wheat	mitochondrion, plastid	45.89	42.23
KRG97693	Soybean	plastid	41.56	41.92
TraesCS1A01G296500.1	Wheat	mitochondrion	45.89	41.9
OQU81447	Sorghum	plastid	34.2	41.8
Bra020363.1-P	Field mustard	cytosol, plastid	43.29	39.68
CDY32696	Canola	cytosol, plastid	42.86	39.44
CDY59509	Canola	cytosol, plastid	42.86	39.29
CDY32794	Canola	peroxisome	41.56	37.07
CDY18861	Canola	mitochondrion	39.39	36.99
Bra004972.1-P	Field mustard	mitochondrion	39.39	36.84
VIT_13s0067g01650.t01	Wine grape	plastid	46.75	36.73
Os05t0353600-00	Rice	plastid	53.25	36.72
CDX74802	Canola	cytosol, mitochondrion	38.96	36.44
HORVU7Hr1G076170.1	Barley	plastid	34.63	36.04
AT5G58530.1	Thale cress	cytosol, plastid	42.42	35.9
KRH72724	Soybean	plastid	43.29	35.59
KRH73271	Soybean	plastid	46.32	35.55
Bra004971.1-P	Field mustard	plastid	37.23	33.99
KRH17081	Soybean	plastid	43.29	33.11
GSMUA_Achr8P24180_001	Banana	cytosol	42.42	28.08
GSMUA_Achr2P20360_001	Banana	cytosol	33.33	28.0
GSMUA_Achr6P13210_001	Banana	cytosol	31.6	26.45
GSMUA_Achr3P01620_001	Banana	mitochondrion	38.96	25.5
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	32.47	25.08
Solyc06g082170.2.1	Tomato	cytosol, plastid	42.42	23.61
GSMUA_Achr4P00540_001	Banana	mitochondrion	39.83	23.41
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	35.06	20.05
GSMUA_Achr10P...	Banana	cytosol	31.6	19.62
GSMUA_Achr6P18300_001	Banana	cytosol	32.47	19.23
GSMUA_Achr9P02540_001	Banana	cytosol	31.6	18.62

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G29410_001	EnsemblPlants:GSMUA_Achr5P29410_001
EnsemblPlants:GSMUA_Achr5T29410_001	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M0T2R5	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF197	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002963737	SEG:seg

Description

glutaredoxin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G29410_001]

Coordinates

chr5:-:29150459..29151154

Molecular Weight (calculated)

25007.1 Da

IEP (calculated)

9.357

GRAVY (calculated)

-0.110

Length

231 amino acids

Sequence
(BLAST)

001: MWPPWVKTAR SSAAAGAVCR SPTFSSPTLR DLQAILRDDH DAAHSSSPTL RRILHRARLA SSALRALRSA VSDPYRHPRR GGVVLYFTSL RVVRRTFEDC
101: RAVRSILRGL RVAVDERDLS MDSRFLAELQ AALGLQRPTL PQVFIAGRCL GGADEIRRLH ESGELKALIE GAAAPTVASA CEGCGGVRFV LCAACSGSHK
201: RYSDKGGGFR TCTECNENGL VRCPDCCAVA L

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.