Factsheet for HORVU1Hr1G060210.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G048520.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58530.1	HORVU2Hr1G048520.1	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G222600.1	Wheat	mitochondrion	87.55	91.34
TraesCS1D01G224200.1	Wheat	mitochondrion	86.72	90.48
TraesCS1B01G235900.1	Wheat	mitochondrion	85.06	88.74
EES18035	Sorghum	mitochondrion	70.95	71.25
Zm00001d010509_P001	Maize	mitochondrion	70.95	69.23
Zm00001d038018_P001	Maize	mitochondrion	68.46	69.04
Os05t0353600-00	Rice	plastid	75.52	54.33
GSMUA_Achr6P32840_001	Banana	cytosol	47.3	48.93
GSMUA_Achr5P29410_001	Banana	mitochondrion	45.23	47.19
GSMUA_Achr4P18760_001	Banana	plastid	45.23	46.19
GSMUA_Achr5P14280_001	Banana	plastid	42.32	44.54
Bra002640.1-P	Field mustard	cytosol	21.58	44.07
HORVU3Hr1G087930.1	Barley	plastid	45.23	43.95
GSMUA_Achr7P18270_001	Banana	mitochondrion	46.89	43.46
KRH14919	Soybean	plastid	42.74	42.56
CDX74801	Canola	cytosol	29.05	41.92
GSMUA_Achr6P23380_001	Banana	mitochondrion	40.66	41.7
KRH30192	Soybean	plastid	37.76	39.39
KRH31178	Soybean	plastid	37.34	39.3
HORVU7Hr1G043870.1	Barley	cytosol	12.45	38.96
KRG97693	Soybean	plastid	36.51	38.43
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	39.0	38.21
Bra020363.1-P	Field mustard	cytosol, plastid	39.83	38.1
CDY32696	Canola	cytosol, plastid	39.42	37.85
PGSC0003DMT400078241	Potato	cytosol, plastid	37.34	37.5
CDY32794	Canola	peroxisome	40.25	37.45
CDY59509	Canola	cytosol, plastid	39.0	37.3
HORVU1Hr1G070570.1	Barley	plastid	40.25	37.16
KRG98239	Soybean	plastid	36.1	36.86
Solyc06g082180.1.1	Tomato	cytosol, plastid	38.59	36.61
PGSC0003DMT400078242	Potato	cytosol, plastid	38.17	36.22
KRH72724	Soybean	plastid	41.08	35.23
KRH73271	Soybean	plastid	43.15	34.55
AT5G58530.1	Thale cress	cytosol, plastid	39.0	34.43
VIT_13s0067g01650.t01	Wine grape	plastid	39.83	32.65
CDY18861	Canola	mitochondrion	33.2	32.52
CDX74802	Canola	cytosol, mitochondrion	33.2	32.39
Bra004972.1-P	Field mustard	mitochondrion	33.2	32.39
KRH17081	Soybean	plastid	40.25	32.12
HORVU7Hr1G076170.1	Barley	plastid	29.46	31.98
Bra004971.1-P	Field mustard	plastid	31.95	30.43
HORVU2Hr1G059940.1	Barley	mitochondrion	27.8	24.81
HORVU1Hr1G021100.2	Barley	cytosol	29.46	22.83
HORVU4Hr1G075190.2	Barley	mitochondrion	30.71	22.63
Solyc06g082170.2.1	Tomato	cytosol, plastid	36.51	21.2
HORVU5Hr1G092580.1	Barley	cytosol	20.75	20.66
HORVU0Hr1G017160.1	Barley	mitochondrion	30.71	19.47
HORVU7Hr1G038000.2	Barley	cytosol, plastid	31.54	17.97
HORVU2Hr1G115200.2	Barley	cytosol	32.37	16.92
HORVU3Hr1G057240.1	Barley	cytosol	27.39	16.18
HORVU2Hr1G073040.1	Barley	cytosol	26.97	15.48

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	UniProt:A0A287FUI9	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin
EnsemblPlantsGene:HORVU1Hr1G060210	EnsemblPlants:HORVU1Hr1G060210.1	InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF78	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000B463A73	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:+:437860263..437860989

Molecular Weight (calculated)

25697.7 Da

IEP (calculated)

10.524

GRAVY (calculated)

-0.246

Length

241 amino acids

Sequence
(BLAST)

001: RPRQPSTTAM WTSWTRRKPA ARRLTNSPSS NSSVTSSSKD HSGISSVLDD AAAPPAGGGK VVLHRVRSST KLRTCKSFAA AEEAAAAPVA AERRVVLYFT
101: SLRAVRPTFE ACRDVRAILR GLRVGVDERD VSMDAAFLTE LRVLMRRDRP PLPQLFVGGR LVGDADDVRA LHESGELRRV VAGAPQLPPT PCASCGGSRF
201: GPCVACGGSH RWFSEKTGGF RVCSACNENG LVRCTACCSG G

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.