Factsheet for GSMUA_Achr7P18270_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P33210_001
GSMUA_Achr7P00390_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58530.1	GSMUA_Achr4P33210_001	AT1G30860.1	21798944
AT5G58530.1	GSMUA_Achr7P00390_001	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P23380_001	Banana	mitochondrion	61.15	67.66
GSMUA_Achr6P32840_001	Banana	cytosol	51.92	57.94
Zm00001d012471_P001	Maize	cytosol, plastid	25.38	57.39
GSMUA_Achr5P29410_001	Banana	mitochondrion	47.69	53.68
TraesCS3A01G349200.1	Wheat	plastid	48.46	50.81
TraesCS3B01G381400.1	Wheat	mitochondrion, plastid	48.08	50.2
Os01t0829400-01	Rice	mitochondrion	48.85	49.8
TraesCS3D01G343100.1	Wheat	plastid	48.08	49.8
Zm00001d010594_P001	Maize	plastid	47.69	49.8
HORVU3Hr1G087930.1	Barley	plastid	47.31	49.6
GSMUA_Achr4P18760_001	Banana	plastid	45.0	49.58
KXG33640	Sorghum	mitochondrion	50.38	49.43
GSMUA_Achr5P14280_001	Banana	plastid	42.69	48.47
TraesCS1D01G224200.1	Wheat	mitochondrion	42.31	47.62
TraesCS1A01G222600.1	Wheat	mitochondrion	42.31	47.62
EES19677	Sorghum	plastid	48.08	47.35
TraesCS1B01G235900.1	Wheat	mitochondrion	41.92	47.19
EES18035	Sorghum	mitochondrion	43.46	47.08
Os05t0471350-00	Rice	mitochondrion, plastid	46.54	47.08
HORVU1Hr1G060210.1	Barley	mitochondrion, plastid	43.46	46.89
KRH30192	Soybean	plastid	40.38	45.45
Zm00001d038018_P001	Maize	mitochondrion	41.15	44.77
PGSC0003DMT400078241	Potato	cytosol, plastid	41.15	44.58
Zm00001d043006_P001	Maize	plastid	49.23	44.29
Zm00001d010509_P001	Maize	mitochondrion	41.92	44.13
Bra002640.1-P	Field mustard	cytosol	20.0	44.07
KRH14919	Soybean	plastid	40.77	43.8
KRG98239	Soybean	plastid	39.23	43.22
GSMUA_Achr8P22080_001	Banana	cytosol	32.69	43.15
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	40.38	42.68
Solyc06g082180.1.1	Tomato	cytosol, plastid	41.54	42.52
PGSC0003DMT400078242	Potato	cytosol, plastid	41.15	42.13
Zm00001d038445_P001	Maize	cytosol	44.62	41.88
Os10t0343900-01	Rice	cytosol	21.15	41.67
HORVU1Hr1G070570.1	Barley	plastid	41.54	41.38
CDX74801	Canola	cytosol	26.15	40.72
TraesCS1A01G296500.1	Wheat	mitochondrion	39.23	40.32
TraesCS1B01G305600.1	Wheat	mitochondrion, plastid	38.85	40.24
GSMUA_Achr8P09670_001	Banana	cytosol	31.54	40.0
TraesCS1D01G294800.1	Wheat	plastid	38.08	39.44
KRH31178	Soybean	plastid	34.62	39.3
CDY59509	Canola	cytosol, plastid	38.08	39.29
CDY32696	Canola	cytosol, plastid	37.69	39.04
Bra020363.1-P	Field mustard	cytosol, plastid	37.69	38.89
KRG97693	Soybean	plastid	33.46	37.99
CDY32794	Canola	peroxisome	37.69	37.84
KRH72724	Soybean	plastid	40.38	37.37
VIT_13s0067g01650.t01	Wine grape	plastid	41.15	36.39
Os05t0353600-00	Rice	plastid	46.54	36.12
OQU81447	Sorghum	plastid	26.15	35.98
AT5G58530.1	Thale cress	cytosol, plastid	37.69	35.9
KRH73271	Soybean	plastid	41.15	35.55
HORVU7Hr1G076170.1	Barley	plastid	30.0	35.14
KRH17081	Soybean	plastid	40.38	34.77
CDY18861	Canola	mitochondrion	32.31	34.15
Bra004972.1-P	Field mustard	mitochondrion	31.54	33.2
CDX74802	Canola	cytosol, mitochondrion	31.15	32.79
Bra004971.1-P	Field mustard	plastid	30.0	30.83
GSMUA_Achr3P01620_001	Banana	mitochondrion	35.38	26.06
GSMUA_Achr8P24180_001	Banana	cytosol	34.62	25.79
Solyc06g082170.2.1	Tomato	cytosol, plastid	40.0	25.06
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	28.46	24.75
GSMUA_Achr2P20360_001	Banana	cytosol	26.15	24.73
GSMUA_Achr4P00540_001	Banana	mitochondrion	36.92	24.43
GSMUA_Achr6P13210_001	Banana	cytosol	25.0	23.55
GSMUA_Achr10P...	Banana	cytosol	28.85	20.16
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	30.77	19.8
GSMUA_Achr6P18300_001	Banana	cytosol	25.77	17.18
GSMUA_Achr9P02540_001	Banana	cytosol	25.0	16.58

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr7G18270_001	EnsemblPlants:GSMUA_Achr7P18270_001
EnsemblPlants:GSMUA_Achr7T18270_001	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M0TIL4	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF182	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000296E01F	SEG:seg

Description

glutaredoxin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G18270_001]

Coordinates

chr7:-:21044371..21045153

Molecular Weight (calculated)

28195.7 Da

IEP (calculated)

8.740

GRAVY (calculated)

-0.335

Length

260 amino acids

Sequence
(BLAST)

001: MWAPWGNRLP RGGATTTATS SLPPPQLPPP TSSIIRSSSS LKDLLSLLDE YDAHDASASP SRGPRPPPPP PPPPVIHHVR SASSALRLWC SPPEDPFGLP
101: PGEKKRVVLY FTSLRAVRHT FEDCAAVRAI LCGLRVAVDE RDVSMDAGFL RELKGVLGVR RWHLGLPQLF IGGRHVGGAD DVRRLHEAGE LRRYVEGAAQ
201: ATGRACEWCG DVRFVLCRSC SGSRRCYHDK GGAGGGFRTC TACNENGLVR CRRCCDPDAV

Best Arabidopsis Sequence Match ( AT5G39865.1 )
(BLAST)

001: MGCASSKNRN RCRNCKGGLS PVIVPRSYSM HVHHPAQHTG DSYHTVALTS STIGSLSLCD SSLRHFHKHL EDSFYKQRVS DQMGEETLIS GNGFLHGDEE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE

Arabidopsis Description

Uncharacterized protein At5g39865 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE8]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.