Factsheet for Os10t0343900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0107500-00
Os07t0499800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58530.1	Os03t0107500-00	AT1G30860.1	21798944
AT5G58530.1	Os07t0499800-01	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012471_P001	Maize	cytosol, plastid	56.82	65.22
Os01t0829400-01	Rice	mitochondrion	75.0	38.82
TraesCS3A01G349200.1	Wheat	plastid	65.91	35.08
HORVU3Hr1G087930.1	Barley	plastid	65.91	35.08
TraesCS3B01G381400.1	Wheat	mitochondrion, plastid	65.91	34.94
TraesCS3D01G343100.1	Wheat	plastid	65.91	34.66
KXG33640	Sorghum	mitochondrion	67.42	33.58
Bra002640.1-P	Field mustard	cytosol	28.03	31.36
Zm00001d043006_P001	Maize	plastid	65.91	30.1
Os05t0471350-00	Rice	mitochondrion, plastid	57.58	29.57
OQU81447	Sorghum	plastid	41.67	29.1
GSMUA_Achr5P29410_001	Banana	mitochondrion	45.45	25.97
CDX74801	Canola	cytosol	32.58	25.75
GSMUA_Achr5P14280_001	Banana	plastid	43.18	24.89
HORVU7Hr1G076170.1	Barley	plastid	40.91	24.32
GSMUA_Achr6P32840_001	Banana	cytosol	42.42	24.03
GSMUA_Achr4P18760_001	Banana	plastid	40.15	22.46
GSMUA_Achr6P23380_001	Banana	mitochondrion	38.64	21.7
GSMUA_Achr7P18270_001	Banana	mitochondrion	41.67	21.15
Os03t0356400-01	Rice	cytosol	31.82	20.69
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	36.36	19.51
Os07t0659900-01	Rice	cytosol	31.06	19.43
KRH14919	Soybean	plastid	35.61	19.42
KRG97693	Soybean	plastid	31.82	18.34
PGSC0003DMT400078241	Potato	cytosol, plastid	33.33	18.33
Solyc06g082180.1.1	Tomato	cytosol, plastid	34.85	18.11
PGSC0003DMT400078242	Potato	cytosol, plastid	34.85	18.11
KRH31178	Soybean	plastid	31.06	17.9
KRG98239	Soybean	plastid	31.82	17.8
KRH30192	Soybean	plastid	31.06	17.75
CDY18861	Canola	mitochondrion	32.58	17.48
Bra004972.1-P	Field mustard	mitochondrion	32.58	17.41
Bra004971.1-P	Field mustard	plastid	33.33	17.39
CDX74802	Canola	cytosol, mitochondrion	31.82	17.0
Bra020363.1-P	Field mustard	cytosol, plastid	31.82	16.67
CDY59509	Canola	cytosol, plastid	31.82	16.67
Os05t0353600-00	Rice	plastid	41.67	16.42
VIT_13s0067g01650.t01	Wine grape	plastid	35.61	15.99
CDY32696	Canola	cytosol, plastid	30.3	15.94
CDY32794	Canola	peroxisome	31.06	15.83
AT5G58530.1	Thale cress	cytosol, plastid	32.58	15.75
KRH72724	Soybean	plastid	33.33	15.66
KRH73271	Soybean	plastid	34.85	15.28
KRH17081	Soybean	plastid	33.33	14.57
Os02t0748800-00	Rice	cytosol, mitochondrion	34.85	12.47
Os03t0648800-00	Rice	mitochondrion	30.3	12.35
Os07t0159900-01	Rice	mitochondrion	23.48	12.11
Os06t0226100-00	Rice	plastid	34.09	11.75
Os03t0170800-00	Rice	mitochondrion	28.03	11.49
Solyc06g082170.2.1	Tomato	cytosol, plastid	34.85	11.08
Os02t0102000-00	Rice	cytosol	25.76	10.56
Os01t0235900-00	Rice	plasma membrane	25.76	8.7
Os04t0641300-01	Rice	cytosol, plastid	28.79	8.58
Os04t0412800-01	Rice	cytosol, plastid	28.79	8.48
Os08t0171333-00	Rice	plastid	17.42	7.28

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.2	ProteinID:BAF26305.1	ProteinID:BAT10425.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114
InterPro:Glutaredoxin	InterPro:IPR002109	EnsemblPlantsGene:Os10g0343900	EnsemblPlants:Os10t0343900-01	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF75	UniProt:Q0IYB0	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0000DD9949	SEG:seg

Description

Thioredoxin fold domain containing protein. (Os10t0343900-01)

Coordinates

chr10:-:10216071..10218319

Molecular Weight (calculated)

14339.5 Da

IEP (calculated)

10.021

GRAVY (calculated)

-0.094

Length

132 amino acids

Sequence
(BLAST)

001: YFHFHFDQPN LPLLSSPLLS VDSRRPLLAM DPRYLQELGA LLPRARGVTL PQVFVGGRHL GGAEEVRRLH ESGELRRVVA GAGATALAAC SRCGGERYVL
101: CGSCNGSHKR YSLKEATVRG RLAPPLLPLP LS

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.