Factsheet for GSMUA_Achr5P14280_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P33210_001
GSMUA_Achr7P00390_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58530.1	GSMUA_Achr4P33210_001	AT1G30860.1	21798944
AT5G58530.1	GSMUA_Achr7P00390_001	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P29410_001	Banana	mitochondrion	76.86	76.19
GSMUA_Achr4P18760_001	Banana	plastid	76.86	74.58
Zm00001d012471_P001	Maize	cytosol, plastid	28.82	57.39
TraesCS3A01G349200.1	Wheat	plastid	55.9	51.61
Os01t0829400-01	Rice	mitochondrion	57.21	51.37
GSMUA_Achr6P32840_001	Banana	cytosol	51.97	51.07
TraesCS3B01G381400.1	Wheat	mitochondrion, plastid	55.46	51.0
TraesCS3D01G343100.1	Wheat	plastid	55.9	51.0
KXG33640	Sorghum	mitochondrion	58.95	50.94
Os05t0471350-00	Rice	mitochondrion, plastid	56.33	50.19
Bra002640.1-P	Field mustard	cytosol	25.76	50.0
HORVU3Hr1G087930.1	Barley	plastid	53.28	49.19
Zm00001d010594_P001	Maize	plastid	53.28	49.0
EES19677	Sorghum	plastid	55.46	48.11
EES18035	Sorghum	mitochondrion	49.78	47.5
GSMUA_Achr8P22080_001	Banana	cytosol	40.17	46.7
Zm00001d038018_P001	Maize	mitochondrion	48.47	46.44
TraesCS1B01G235900.1	Wheat	mitochondrion	45.85	45.45
Zm00001d043006_P001	Maize	plastid	57.21	45.33
TraesCS1A01G222600.1	Wheat	mitochondrion	45.41	45.02
TraesCS1D01G224200.1	Wheat	mitochondrion	45.41	45.02
Zm00001d010509_P001	Maize	mitochondrion	48.47	44.94
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	47.16	43.9
GSMUA_Achr6P23380_001	Banana	mitochondrion	44.98	43.83
CDX74801	Canola	cytosol	31.88	43.71
KRH30192	Soybean	plastid	43.67	43.29
Os10t0343900-01	Rice	cytosol	24.89	43.18
Zm00001d038445_P001	Maize	cytosol	51.97	42.96
GSMUA_Achr7P18270_001	Banana	mitochondrion	48.47	42.69
KRH14919	Soybean	plastid	44.98	42.56
HORVU1Hr1G070570.1	Barley	plastid	48.47	42.53
GSMUA_Achr8P09670_001	Banana	cytosol	37.99	42.44
KRG98239	Soybean	plastid	43.67	42.37
HORVU1Hr1G060210.1	Barley	mitochondrion, plastid	44.54	42.32
KRH31178	Soybean	plastid	41.05	41.05
TraesCS1D01G294800.1	Wheat	plastid	44.98	41.04
TraesCS1B01G305600.1	Wheat	mitochondrion, plastid	44.54	40.64
Bra020363.1-P	Field mustard	cytosol, plastid	44.54	40.48
TraesCS1A01G296500.1	Wheat	mitochondrion	44.54	40.32
CDY32696	Canola	cytosol, plastid	44.1	40.24
KRG97693	Soybean	plastid	40.17	40.17
CDY59509	Canola	cytosol, plastid	43.67	39.68
CDY32794	Canola	peroxisome	44.54	39.38
PGSC0003DMT400078241	Potato	cytosol, plastid	41.05	39.17
OQU81447	Sorghum	plastid	32.31	39.15
Solyc06g082180.1.1	Tomato	cytosol, plastid	43.23	38.98
PGSC0003DMT400078242	Potato	cytosol, plastid	43.23	38.98
AT5G58530.1	Thale cress	cytosol, plastid	44.1	37.0
CDY18861	Canola	mitochondrion	37.99	35.37
Bra004972.1-P	Field mustard	mitochondrion	37.99	35.22
KRH72724	Soybean	plastid	42.79	34.88
CDX74802	Canola	cytosol, mitochondrion	37.55	34.82
VIT_13s0067g01650.t01	Wine grape	plastid	44.54	34.69
Os05t0353600-00	Rice	plastid	50.22	34.33
HORVU7Hr1G076170.1	Barley	plastid	33.19	34.23
KRH73271	Soybean	plastid	44.98	34.22
Bra004971.1-P	Field mustard	plastid	36.68	33.2
KRH17081	Soybean	plastid	43.23	32.78
GSMUA_Achr2P20360_001	Banana	cytosol	31.88	26.55
GSMUA_Achr8P24180_001	Banana	cytosol	39.3	25.79
GSMUA_Achr3P01620_001	Banana	mitochondrion	37.55	24.36
GSMUA_Achr6P13210_001	Banana	cytosol	27.95	23.19
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	30.13	23.08
Solyc06g082170.2.1	Tomato	cytosol, plastid	40.61	22.41
GSMUA_Achr4P00540_001	Banana	mitochondrion	38.43	22.39
GSMUA_Achr10P...	Banana	cytosol	30.13	18.55
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	31.44	17.82
GSMUA_Achr6P18300_001	Banana	cytosol	29.69	17.44
GSMUA_Achr9P02540_001	Banana	cytosol	28.82	16.84

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G14280_001	EnsemblPlants:GSMUA_Achr5P14280_001
EnsemblPlants:GSMUA_Achr5T14280_001	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M0SYF7	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF197	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002949CF5	SEG:seg

Description

glutaredoxin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G14280_001]

Coordinates

chr5:-:10254805..10255494

Molecular Weight (calculated)

24820.8 Da

IEP (calculated)

8.505

GRAVY (calculated)

-0.157

Length

229 amino acids

Sequence
(BLAST)

001: MWPPWVNTTR SSGAACRSPS FSSPTLKDLH AILDDGPGKP PSSHALRRIL HRACLASTAL RALRSAASAP SSDPLDRRRR GVFVLYFTSL RVVRRTFEDC
101: RSVRSILRGL RVAVDERDLS MDPRFLAELQ AALDCPQPTL PQVFLAGRCL GGADEIHGLH ESGELKALID GLAPATSVCN RCGGVRFVLC AVCSGSHKRY
201: SDKGGDFRAC DECNENGLVR CPDCLTSAV

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.