Factsheet for GSMUA_Achr6P18300_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P02540_001	Banana	cytosol	80.0	79.59
GSMUA_Achr6P13210_001	Banana	cytosol	43.08	60.87
Bra005786.1-P	Field mustard	cytosol	16.15	57.8
CDY11274	Canola	cytosol	15.9	56.88
GSMUA_Achr2P20360_001	Banana	cytosol	40.0	56.73
CDX80893	Canola	cytosol	15.64	55.96
VIT_08s0007g03220.t01	Wine grape	cytosol	50.51	49.5
CDY14169	Canola	cytosol	31.03	49.39
Solyc09g009860.1.1	Tomato	cytosol	48.21	47.12
PGSC0003DMT400023120	Potato	cytosol	48.21	47.0
CDY04902	Canola	nucleus	40.0	44.96
Bra028812.1-P	Field mustard	nucleus	40.0	44.7
KRH67928	Soybean	cytosol	50.0	42.58
AT5G03870.1	Thale cress	cytosol	41.79	42.45
GSMUA_Achr8P09670_001	Banana	cytosol	18.21	34.63
GSMUA_Achr8P22080_001	Banana	cytosol	17.18	34.01
CDX80894	Canola	nucleus	16.92	33.67
GSMUA_Achr5P29410_001	Banana	mitochondrion	19.23	32.47
CDY11275	Canola	nucleus	16.41	32.32
GSMUA_Achr3P01620_001	Banana	mitochondrion	27.95	30.88
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	23.59	30.77
GSMUA_Achr5P14280_001	Banana	plastid	17.44	29.69
GSMUA_Achr4P18760_001	Banana	plastid	17.69	29.24
GSMUA_Achr6P32840_001	Banana	cytosol	17.18	28.76
GSMUA_Achr8P24180_001	Banana	cytosol	25.13	28.08
GSMUA_Achr6P23380_001	Banana	mitochondrion	16.41	27.23
GSMUA_Achr4P00540_001	Banana	mitochondrion	26.41	26.21
GSMUA_Achr7P18270_001	Banana	mitochondrion	17.18	25.77
GSMUA_Achr10P...	Banana	cytosol	24.1	25.27
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	25.38	24.5

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G18300_001	EnsemblPlants:GSMUA_Achr6P18300_001
EnsemblPlants:GSMUA_Achr6T18300_001	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M0T828	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF79	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000294F73B	SEG:seg

Description

glutaredoxin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G18300_001]

Coordinates

chr6:-:12427096..12428331

Molecular Weight (calculated)

43190.5 Da

IEP (calculated)

6.406

GRAVY (calculated)

-0.567

Length

390 amino acids

Sequence
(BLAST)

001: MGCISSKLLA VAEVGEELLF SGDAGPDGDC PNHFVSLTST TYGALSLDRG DEKANDPKAP AEKEKSAAAE EERPSEVIDA RELMGDLADE TPSRSPPQKK
101: RPHKPSPALR RSPAVRAAMS PVMPRNWFAG KENTPLRLEP KRSDHDAYRA SKPFRSLDNT PWTNLVSAIS KKGTPNSARS NNSNRDFSNS KSRRSLSPLF
201: DPELLARFER EHCEEGEQIK RMVHVKICDS VILLQSFEEK CPPGGEDTVV LYTTTLRGIR KTFEDCNTVR SLIESYGGHI VERDISMDSG YREELRLLMG
301: RKEVKVPIVF VKGRCVGGAE EIVRLEEEDE LGLLLEGLPR ATKWCEGCGG LRFVMCMDCN GSCKVLDSEK KKVKCEGCNE NGLIHCPICC

Best Arabidopsis Sequence Match ( AT5G03870.1 )
(BLAST)

001: MGCVSSKLGK KKLIREIRVN NGGDHIVSLT STTYGHLDLD ERAETSPKSL EVTKGEVFES EIIPRRSIKR DDPEIINTWE LMEDLEDSMH VSNPQKISPK
101: SRGIFGKSWK TPVKSVVESP KRGSSKRFGG KENNSRGVSP NQILKPKNIL ETPKRGVMRL SFPLKSEESS VTVTQRRKSY SPMFDPDLVA SYERELSQEK
201: EQIKMVISPV VHESRKTEKT ERILEKFPEK CPPGGEHSVV IYITTLRGIR KTFEDCNVVR SILDSHEVRF SERDVSMHSV FKEEIRGIMG TKHVKIPAVF
301: VKGRMVGSVE EVMRLEEEGK LGILLEGIPA ARLGGSCCRG CGGMRFMMCV VCNGSCKVRE EEKKSMVKCL KCNENGLVLC PICS

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9LZC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.