Factsheet for Bra005786.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2
cytosol 2
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11274	Canola	cytosol	98.17	98.17
CDX80893	Canola	cytosol	93.58	93.58
Bra002640.1-P	Field mustard	cytosol	42.2	38.98
Bra028812.1-P	Field mustard	nucleus	83.49	26.07
AT5G03870.1	Thale cress	cytosol	80.73	22.92
GSMUA_Achr6P13210_001	Banana	cytosol	55.05	21.74
Bra023284.1-P	Field mustard	cytosol	54.13	19.67
Bra020363.1-P	Field mustard	cytosol, plastid	42.2	18.25
Bra005898.1-P	Field mustard	cytosol, mitochondrion	39.45	17.41
Bra004972.1-P	Field mustard	mitochondrion	38.53	17.0
Bra000716.1-P	Field mustard	cytosol	47.71	16.77
GSMUA_Achr6P18300_001	Banana	cytosol	57.8	16.15
Bra004971.1-P	Field mustard	plastid	36.7	15.81
Bra008801.1-P	Field mustard	plastid	38.53	15.73
Bra009197.1-P	Field mustard	cytosol	34.86	15.7
GSMUA_Achr9P02540_001	Banana	cytosol	55.96	15.56
VIT_08s0007g03220.t01	Wine grape	cytosol	55.05	15.08
Solyc09g009860.1.1	Tomato	cytosol	55.05	15.04
PGSC0003DMT400023120	Potato	cytosol	55.05	15.0
Bra006216.1-P	Field mustard	plastid	34.86	14.39
KRH67928	Soybean	cytosol	58.72	13.97
HORVU2Hr1G073040.1	Barley	cytosol	53.21	13.81
TraesCS2B01G311500.1	Wheat	mitochondrion	53.21	13.74
TraesCS2A01G295000.1	Wheat	mitochondrion	53.21	13.68
Zm00001d003779_P001	Maize	cytosol	55.96	13.65
EES10743	Sorghum	cytosol	55.96	13.53
TraesCS2D01G292800.1	Wheat	mitochondrion	52.29	13.44
Os04t0412800-01	Rice	cytosol, plastid	55.05	13.39
Bra033062.1-P	Field mustard	cytosol	39.45	12.76
Bra016941.1-P	Field mustard	plastid	42.2	12.5
Bra040917.1-P	Field mustard	cytosol	39.45	11.94
Bra028902.1-P	Field mustard	mitochondrion	38.53	11.73
Bra025357.1-P	Field mustard	cytosol	44.04	11.68
Bra007299.1-P	Field mustard	plastid	42.2	11.65
Bra014646.1-P	Field mustard	plastid	40.37	11.2
Bra000225.1-P	Field mustard	plastid	40.37	10.97
Bra025638.1-P	Field mustard	cytosol	40.37	10.73
Bra039044.1-P	Field mustard	cytosol	40.37	10.43
CDX80894	Canola	nucleus	2.75	1.53
CDY11275	Canola	nucleus	2.75	1.52

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.2	EnsemblPlantsGene:Bra005786	EnsemblPlants:Bra005786.1	EnsemblPlants:Bra005786.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4CNJ8	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF79	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000253FB8E	SEG:seg	:

Description

AT5G03870 (E=2e-032) | glutaredoxin family protein

Coordinates

chrA03:-:610055..610384

Molecular Weight (calculated)

11915.1 Da

IEP (calculated)

8.301

GRAVY (calculated)

0.141

Length

109 amino acids

Sequence
(BLAST)

001: MHSVFKEEIR GILGTRQVKI PAVFVKGRMV GSVEEVMRLE EEGRLGILLE CMPKQKMGGG CCCGCGGLRF VMCDVCNGSC KVRDVEKKKN TVKCLVCNEN
101: GLVLCPICS

Best Arabidopsis Sequence Match ( AT5G03870.1 )
(BLAST)

001: MGCVSSKLGK KKLIREIRVN NGGDHIVSLT STTYGHLDLD ERAETSPKSL EVTKGEVFES EIIPRRSIKR DDPEIINTWE LMEDLEDSMH VSNPQKISPK
101: SRGIFGKSWK TPVKSVVESP KRGSSKRFGG KENNSRGVSP NQILKPKNIL ETPKRGVMRL SFPLKSEESS VTVTQRRKSY SPMFDPDLVA SYERELSQEK
201: EQIKMVISPV VHESRKTEKT ERILEKFPEK CPPGGEHSVV IYITTLRGIR KTFEDCNVVR SILDSHEVRF SERDVSMHSV FKEEIRGIMG TKHVKIPAVF
301: VKGRMVGSVE EVMRLEEEGK LGILLEGIPA ARLGGSCCRG CGGMRFMMCV VCNGSCKVRE EEKKSMVKCL KCNENGLVLC PICS

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9LZC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.