Factsheet for Bra025638.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67051	Canola	cytosol	91.46	98.94
AT5G39865.1	Thale cress	cytosol, mitochondrion	63.9	67.18
Bra033062.1-P	Field mustard	cytosol	53.17	64.69
Bra039044.1-P	Field mustard	cytosol	61.95	60.19
Bra025357.1-P	Field mustard	cytosol	59.02	58.88
PGSC0003DMT400017853	Potato	cytosol	43.41	55.11
PGSC0003DMT400003335	Potato	cytosol	53.41	52.27
Solyc02g087850.1.1	Tomato	cytosol, plastid	53.17	52.03
PGSC0003DMT400056766	Potato	cytosol	48.05	49.62
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	53.9	49.11
Zm00001d026424_P001	Maize	cytosol	14.88	48.8
Solyc02g067400.1.1	Tomato	cytosol	33.66	48.59
KRH40113	Soybean	cytosol, mitochondrion	52.68	47.16
KRH01158	Soybean	cytosol	52.44	46.34
KRG93517	Soybean	cytosol	49.02	46.0
Zm00001d027853_P001	Maize	plastid	32.93	41.41
EER95421	Sorghum	mitochondrion, plastid	33.9	41.37
TraesCS4D01G286300.1	Wheat	mitochondrion	32.68	41.1
TraesCS4A01G016500.1	Wheat	mitochondrion	32.93	40.91
HORVU4Hr1G075190.2	Barley	mitochondrion	32.44	40.67
Bra005786.1-P	Field mustard	cytosol	10.73	40.37
GSMUA_Achr4P00540_001	Banana	mitochondrion	38.29	39.95
GSMUA_Achr3P01620_001	Banana	mitochondrion	34.39	39.94
Bra002640.1-P	Field mustard	cytosol	11.46	39.83
Os03t0170800-00	Rice	mitochondrion	31.22	39.75
TraesCS4B01G287700.1	Wheat	mitochondrion	31.46	39.33
GSMUA_Achr8P24180_001	Banana	cytosol	32.68	38.4
Os02t0748800-00	Rice	cytosol, mitochondrion	32.68	36.31
Zm00001d052252_P001	Maize	mitochondrion	32.2	35.87
EES05526	Sorghum	mitochondrion	33.17	35.79
HORVU0Hr1G017160.1	Barley	mitochondrion	32.68	35.26
TraesCS6D01G285000.1	Wheat	mitochondrion	32.44	35.19
TraesCS6B01G334000.1	Wheat	mitochondrion	32.44	34.82
TraesCS6A01G305800.1	Wheat	mitochondrion	32.44	34.55
Zm00001d018058_P001	Maize	plastid	31.46	34.22
Bra016941.1-P	Field mustard	plastid	30.0	33.42
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	32.93	33.42
Bra006216.1-P	Field mustard	plastid	21.22	32.95
Bra004972.1-P	Field mustard	mitochondrion	19.76	32.79
Zm00001d002123_P001	Maize	plastid	33.66	32.55
Bra008801.1-P	Field mustard	plastid	20.98	32.21
Bra023284.1-P	Field mustard	cytosol	23.41	32.0
Bra004971.1-P	Field mustard	plastid	19.27	31.23
Bra007299.1-P	Field mustard	plastid	30.0	31.14
Os06t0226100-00	Rice	plastid	29.02	31.07
Bra020363.1-P	Field mustard	cytosol, plastid	19.02	30.95
Os04t0641300-01	Rice	cytosol, plastid	33.41	30.93
Bra014646.1-P	Field mustard	plastid	29.51	30.79
Bra000716.1-P	Field mustard	cytosol	23.17	30.65
Bra028812.1-P	Field mustard	nucleus	25.85	30.37
TraesCS2D01G523500.1	Wheat	plastid	33.9	30.35
Bra000225.1-P	Field mustard	plastid	29.27	29.93
Zm00001d037218_P001	Maize	plastid	31.22	29.91
TraesCS2B01G551200.1	Wheat	cytosol, plastid	33.17	29.69
TraesCS2A01G521700.1	Wheat	plastid	33.17	29.69
HORVU2Hr1G115200.2	Barley	cytosol	32.68	29.07
HORVU7Hr1G038000.2	Barley	cytosol, plastid	29.76	28.84
Zm00001d044841_P001	Maize	plastid	30.24	28.38
OQU82428	Sorghum	cytosol, plastid	34.15	28.17
TraesCS3D01G334100.1	Wheat	plastid	28.05	28.05
TraesCS3B01G372200.1	Wheat	plastid	28.05	27.98
TraesCS3A01G340600.1	Wheat	plastid	27.8	27.8
Bra009197.1-P	Field mustard	cytosol	16.34	27.69
TraesCS7A01G185200.1	Wheat	mitochondrion, plastid	30.24	27.25
Zm00001d024469_P001	Maize	cytosol, plastid	24.39	27.25
EER88108	Sorghum	plastid	30.24	27.19
EES14625	Sorghum	cytosol, plastid	26.59	26.91
TraesCS7B01G090200.1	Wheat	cytosol, plastid	30.49	26.77
Bra005898.1-P	Field mustard	cytosol, mitochondrion	15.85	26.32
Bra040917.1-P	Field mustard	cytosol	22.44	25.56
TraesCS7D01G186600.1	Wheat	plastid	30.49	24.85
Os08t0171333-00	Rice	plastid	18.05	23.42
Bra028902.1-P	Field mustard	mitochondrion	19.27	22.07

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EnsemblPlantsGene:Bra025638	EnsemblPlants:Bra025638.1	EnsemblPlants:Bra025638.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0016020	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4EA31
PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF110	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0002544B43	SEG:seg	:	:	:	:

Description

AT3G28850 (E=4e-124) | glutaredoxin family protein

Coordinates

chrA04:-:7354889..7356121

Molecular Weight (calculated)

45760.1 Da

IEP (calculated)

5.096

GRAVY (calculated)

-0.587

Length

410 amino acids

Sequence
(BLAST)

001: MGCASSKHKR RCSDCRGGLS PVVVPRSYSM HVHHPPQHSG DSHHTVALTS STVGSLTLCE CPFSHIDKHL EGVREKRVVS DEKKLIPGDG FHQDDLETEK
101: LLQSKLMEAK VWSSMMNQRI PKLLPPKTPI VTPPGEPETI NTWELMEGLE DACPLRPPDH LRSFSFDVVR VQPCDDGPAP FDRPKSRFHD LDPPEIVSSF
201: RKSLQELPDD HPFHIRIPNV DPVSSGSSDE EEGDCRRKPE KVIVYFTSLR GIRKTYEDGC NVRVILKSLG IRLDERDVSM HSGFKDELKE LLRDEFNGGV
301: GITLPRVFLG SKYLGGVEEI KKLNENGTLE KVVDGCERVE DGLTGCGIDC EACGDVRFVP CETCSGSCKI YYDSEDEDGK EEGTEETEYG FQRCPDCNEN
401: GLVRCPICCG

Best Arabidopsis Sequence Match ( AT5G39865.1 )
(BLAST)

001: MGCASSKNRN RCRNCKGGLS PVIVPRSYSM HVHHPAQHTG DSYHTVALTS STIGSLSLCD SSLRHFHKHL EDSFYKQRVS DQMGEETLIS GNGFLHGDEE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE

Arabidopsis Description

Uncharacterized protein At5g39865 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE8]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.