Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G334100.1 | Wheat | plastid | 93.92 | 94.15 |
| TraesCS3A01G340600.1 | Wheat | plastid | 92.94 | 93.17 |
| CDY00113 | Canola | cytosol | 14.36 | 44.36 |
| Zm00001d024469_P001 | Maize | cytosol, plastid | 38.2 | 42.78 |
| EES14625 | Sorghum | cytosol, plastid | 41.12 | 41.73 |
| Os08t0171333-00 | Rice | plastid | 30.66 | 39.87 |
| TraesCS2B01G150900.1 | Wheat | cytosol | 19.46 | 38.84 |
| TraesCS6B01G334000.1 | Wheat | mitochondrion | 33.82 | 36.39 |
| TraesCS2B01G551200.1 | Wheat | cytosol, plastid | 39.9 | 35.81 |
| TraesCS4B01G287700.1 | Wheat | mitochondrion | 27.25 | 34.15 |
| TraesCS1B01G235900.1 | Wheat | mitochondrion | 18.0 | 32.03 |
| CDY04039 | Canola | cytosol | 25.3 | 30.86 |
| TraesCS3B01G381400.1 | Wheat | mitochondrion, plastid | 18.25 | 30.12 |
| Bra033062.1-P | Field mustard | cytosol | 24.57 | 29.97 |
| CDY70277 | Canola | cytosol | 24.57 | 29.97 |
| TraesCS1B01G114500.1 | Wheat | cytosol | 22.38 | 29.77 |
| CDY67051 | Canola | cytosol | 27.25 | 29.55 |
| PGSC0003DMT400017853 | Potato | cytosol | 23.11 | 29.41 |
| CDY30281 | Canola | cytosol | 27.49 | 29.27 |
| TraesCS7B01G090200.1 | Wheat | cytosol, plastid | 32.85 | 28.91 |
| Bra025357.1-P | Field mustard | cytosol | 28.71 | 28.71 |
| CDX86410 | Canola | cytosol | 28.71 | 28.71 |
| CDY20015 | Canola | cytosol | 27.98 | 28.47 |
| CDX85224 | Canola | cytosol | 28.47 | 28.26 |
| TraesCS2B01G263800.1 | Wheat | mitochondrion | 18.49 | 28.15 |
| Bra025638.1-P | Field mustard | cytosol | 27.98 | 28.05 |
| AT3G28850.1 | Thale cress | cytosol | 29.2 | 28.04 |
| Bra039044.1-P | Field mustard | cytosol | 28.71 | 27.96 |
| Solyc02g067400.1.1 | Tomato | cytosol | 19.22 | 27.82 |
| AT5G39865.1 | Thale cress | cytosol, mitochondrion | 26.28 | 27.69 |
| TraesCS1B01G305600.1 | Wheat | mitochondrion, plastid | 16.79 | 27.49 |
| PGSC0003DMT400056766 | Potato | cytosol | 26.28 | 27.2 |
| TraesCS5B01G374300.1 | Wheat | mitochondrion | 20.44 | 26.67 |
| Solyc02g087850.1.1 | Tomato | cytosol, plastid | 27.01 | 26.49 |
| PGSC0003DMT400003335 | Potato | cytosol | 26.76 | 26.25 |
| KRH40113 | Soybean | cytosol, mitochondrion | 29.2 | 26.2 |
| KRH01158 | Soybean | cytosol | 29.2 | 25.86 |
| VIT_14s0108g00400.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 28.22 | 25.78 |
| KRG93517 | Soybean | cytosol | 25.55 | 24.03 |
| TraesCS3B01G189800.1 | Wheat | cytosol | 20.19 | 20.44 |
| TraesCS2B01G311500.1 | Wheat | mitochondrion | 20.92 | 20.38 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G372200.1 | EnsemblPlantsGene:TraesCS3B01G372200 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | InterPro:Glutaredoxin |
| InterPro:IPR002109 | InterPro:Thioredoxin-like_sf | ncoils:Coil | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF80 | PFAM:PF00462 |
| PFscan:PS51354 | SEG:seg | SUPFAM:SSF52833 | TIGR:cd03031 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr3B:+:584911772..584913007
Molecular Weight (calculated)
43198.8 Da
IEP (calculated)
4.995
GRAVY (calculated)
-0.156
Length
411 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSSSTVAR GGVDMSALPA PARPERRHSL PSRAASAMGS LGLCRGRHDG LHPYTTLPLE ETVRGEAQYG APSAEAKAAS FSGDAAAWPA EGRAPMKLSP
101: AGILEGAASS TSSTAHWTAS ATSSTPQFSA SPSWFRGESS SSLPPPVQFV APDFDPAILS LFREALVGQS PSHPAVLFPE NEATTPRETA ALDEVVPPAT
201: RDMPEVTGLV RARVDEFHRK LEEKKEMKEA EAQSATHDAA DEVAVPPPRK AAVVYFTSIR GVRKTFADGA AVRAILFSYR VRVDERDVSM HAAFKDELRN
301: LVGLAAGAGH VLPRVFVLGD GEQQLDLGGA DEVSELHESG ELAHALAGCE TVAAHLPPCV GCGDLRFLPC GTCSGSCKLF AGDEGGCVAD MFEECTECNE
401: NGLIRCPVCC L
101: AGILEGAASS TSSTAHWTAS ATSSTPQFSA SPSWFRGESS SSLPPPVQFV APDFDPAILS LFREALVGQS PSHPAVLFPE NEATTPRETA ALDEVVPPAT
201: RDMPEVTGLV RARVDEFHRK LEEKKEMKEA EAQSATHDAA DEVAVPPPRK AAVVYFTSIR GVRKTFADGA AVRAILFSYR VRVDERDVSM HAAFKDELRN
301: LVGLAAGAGH VLPRVFVLGD GEQQLDLGGA DEVSELHESG ELAHALAGCE TVAAHLPPCV GCGDLRFLPC GTCSGSCKLF AGDEGGCVAD MFEECTECNE
401: NGLIRCPVCC L
001: MGCASSKNRN RCRNCKGGLS PVIVPRSYSM HVHHPAQHTG DSYHTVALTS STIGSLSLCD SSLRHFHKHL EDSFYKQRVS DQMGEETLIS GNGFLHGDEE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE
Arabidopsis Description
Uncharacterized protein At5g39865 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE8]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.