CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033062.1-P	Field mustard	cytosol	99.7	99.7
CDY04039	Canola	cytosol	95.85	95.85
CDY00113	Canola	cytosol	31.45	79.7
CDX85224	Canola	cytosol	76.26	62.08
CDX86410	Canola	cytosol	75.67	62.04
AT3G28850.1	Thale cress	cytosol	78.34	61.68
CDY20015	Canola	cytosol	73.89	61.63
CDY67051	Canola	cytosol	62.91	55.94
CDY30281	Canola	cytosol	63.5	55.44
PGSC0003DMT400017853	Potato	cytosol	47.77	49.85
Zm00001d026424_P001	Maize	cytosol	18.4	49.6
PGSC0003DMT400003335	Potato	cytosol	57.27	46.06
Solyc02g087850.1.1	Tomato	cytosol, plastid	56.68	45.58
PGSC0003DMT400056766	Potato	cytosol	52.52	44.58
Solyc02g067400.1.1	Tomato	cytosol	36.5	43.31
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	54.9	41.11
KRH40113	Soybean	cytosol, mitochondrion	55.49	40.83
KRH01158	Soybean	cytosol	55.79	40.52
CDX80893	Canola	cytosol	13.06	40.37
KRG93517	Soybean	cytosol	52.23	40.27
CDX74801	Canola	cytosol	19.88	40.12
CDY11274	Canola	cytosol	12.76	39.45
Zm00001d027853_P001	Maize	plastid	36.2	37.42
GSMUA_Achr3P01620_001	Banana	mitochondrion	38.58	36.83
TraesCS4D01G286300.1	Wheat	mitochondrion	35.61	36.81
HORVU4Hr1G075190.2	Barley	mitochondrion	35.61	36.7
TraesCS4A01G016500.1	Wheat	mitochondrion	35.91	36.67
CDY14169	Canola	cytosol	26.41	36.33
EER95421	Sorghum	mitochondrion, plastid	36.2	36.31
Os03t0170800-00	Rice	mitochondrion	34.12	35.71
TraesCS4B01G287700.1	Wheat	mitochondrion	34.72	35.67
GSMUA_Achr4P00540_001	Banana	mitochondrion	40.95	35.11
GSMUA_Achr8P24180_001	Banana	cytosol	36.2	34.96
CDX93821	Canola	cytosol	26.11	33.85
CDY01245	Canola	cytosol	25.82	33.59
CDY05109	Canola	cytosol	25.22	32.08
Os02t0748800-00	Rice	cytosol, mitochondrion	35.01	31.98
EES05526	Sorghum	mitochondrion	35.91	31.84
CDX90765	Canola	cytosol	25.22	31.84
Zm00001d052252_P001	Maize	mitochondrion	33.83	30.98
TraesCS6D01G285000.1	Wheat	mitochondrion	34.72	30.95
CDX78539	Canola	cytosol, plastid	24.04	30.92
HORVU0Hr1G017160.1	Barley	mitochondrion	34.72	30.79
CDX76039	Canola	plastid	32.05	30.77
CDY32696	Canola	cytosol, plastid	22.85	30.68
TraesCS6B01G334000.1	Wheat	mitochondrion	34.72	30.63
Zm00001d018058_P001	Maize	plastid	34.12	30.5
TraesCS6A01G305800.1	Wheat	mitochondrion	34.72	30.39
CDX70521	Canola	plastid	24.04	30.22
CDY59509	Canola	cytosol, plastid	22.55	30.16
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	35.91	29.95
CDY70634	Canola	plastid	23.44	29.59
Zm00001d002123_P001	Maize	plastid	37.09	29.48
CDY67732	Canola	plastid	22.55	29.34
CDX98926	Canola	cytosol	20.77	29.17
CDX74802	Canola	cytosol, mitochondrion	21.36	29.15
CDY32794	Canola	peroxisome	22.26	28.96
CDY67834	Canola	cytosol	20.77	28.93
CDY30970	Canola	plastid	31.45	28.8
CDY06932	Canola	plastid	31.45	28.8
CDY18861	Canola	mitochondrion	20.77	28.46
CDY14762	Canola	cytosol, plastid	30.56	28.45
Os06t0226100-00	Rice	plastid	31.16	27.42
CDY06138	Canola	plastid	31.75	27.09
Os04t0641300-01	Rice	cytosol, plastid	35.61	27.09
CDX81007	Canola	cytosol, mitochondrion	17.8	27.03
CDX72074	Canola	plastid	31.75	26.88
CDY55763	Canola	cytosol, mitochondrion	17.51	26.58
CDY35418	Canola	plastid	31.45	26.43
Zm00001d037218_P001	Maize	plastid	33.53	26.4
CDY22520	Canola	plastid	31.16	26.18
Zm00001d044841_P001	Maize	plastid	33.83	26.09
Zm00001d024469_P001	Maize	cytosol, plastid	28.19	25.89
TraesCS2D01G523500.1	Wheat	plastid	35.01	25.76
CDY04902	Canola	nucleus	26.41	25.65
TraesCS2A01G521700.1	Wheat	plastid	34.72	25.55
TraesCS2B01G551200.1	Wheat	cytosol, plastid	34.72	25.55
HORVU7Hr1G038000.2	Barley	cytosol, plastid	32.05	25.53
HORVU2Hr1G115200.2	Barley	cytosol	34.42	25.16
CDY47842	Canola	cytosol	26.71	25.0
TraesCS3D01G334100.1	Wheat	plastid	30.27	24.88
EER88108	Sorghum	plastid	33.53	24.78
TraesCS3B01G372200.1	Wheat	plastid	29.97	24.57
OQU82428	Sorghum	cytosol, plastid	36.2	24.55
TraesCS7A01G185200.1	Wheat	mitochondrion, plastid	32.64	24.18
CDY62024	Canola	cytosol	25.82	24.17
TraesCS3A01G340600.1	Wheat	plastid	29.38	24.15
EES14625	Sorghum	cytosol, plastid	28.49	23.7
TraesCS7B01G090200.1	Wheat	cytosol, plastid	32.64	23.55
TraesCS7D01G186600.1	Wheat	plastid	32.34	21.67
Os08t0171333-00	Rice	plastid	19.29	20.57
CDY04838	Canola	mitochondrion	20.47	19.27
CDY11275	Canola	nucleus	8.01	13.64
CDX80894	Canola	nucleus	7.42	12.76

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:A0A078JXF5	UniProt:A0A078JXF5	EnsemblPlants:CDY70277	ProteinID:CDY70277
ProteinID:CDY70277.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00097672001	InterPro:Glutaredoxin	InterPro:IPR002109
PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF110	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0004EE5423	SEG:seg	:	:	:	:

Description

BnaAnng33180DBnaAnng33180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXF5]

Coordinates

chrLK041659:-:1115..2128

Molecular Weight (calculated)

37827.7 Da

IEP (calculated)

5.353

GRAVY (calculated)

-0.718

Length

337 amino acids

Sequence
(BLAST)

001: MGCASSKHRK RCLHCRQGYS PVDMSPRPSV QHPPQHSDDM LALSSSTLGS LKLCYSSFGH SRIHLADFTG NLATDQSGEN RQEDGFGQKE DRDKEMQAKL
101: MEAKVWSSMM NDKIPKIVPK TPILTPPGEP ETINTWEMMD GLEDSVSPLR STSHVRSFSF DGGCKRPKEN GNVILYFTSL RGIRKTYEDS CDVRVILKGI
201: GVRVDERDVS MHSSFRDELK ELLLEGKFNN DVGITLPRVF LGRKYLGGAE EIRKLNEDGK LEKILEGCER VEENKNGNGK ECEACGDIRF VPCETCSGSC
301: KVYNEDDESE KEDRDYGFQT CPDCNENGLV RCPLCCD

Best Arabidopsis Sequence Match ( AT5G39865.1 )
(BLAST)

001: MGCASSKNRN RCRNCKGGLS PVIVPRSYSM HVHHPAQHTG DSYHTVALTS STIGSLSLCD SSLRHFHKHL EDSFYKQRVS DQMGEETLIS GNGFLHGDEE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE

Arabidopsis Description

Uncharacterized protein At5g39865 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE8]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.