CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014646.1-P	Field mustard	plastid	99.15	88.55
CDY30970	Canola	plastid	91.45	87.23
CDY06138	Canola	plastid	80.34	71.39
CDX72074	Canola	plastid	79.2	69.85
AT3G57070.1	Thale cress	plastid	77.78	65.47
CDY06932	Canola	plastid	60.4	57.61
CDY35418	Canola	plastid	65.53	57.36
CDY14762	Canola	cytosol, plastid	58.69	56.91
CDY22520	Canola	plastid	64.39	56.36
VIT_08s0007g05530.t01	Wine grape	cytosol	36.47	52.24
Solyc04g039900.1.1	Tomato	cytosol, extracellular, nucleus	37.61	48.53
KRG95123	Soybean	plastid	51.0	42.22
Solyc10g079560.1.1	Tomato	plastid	50.71	41.01
PGSC0003DMT400020985	Potato	cytosol, plastid	50.71	41.01
PGSC0003DMT400007648	Potato	cytosol	45.58	40.4
CDY11274	Canola	cytosol	12.54	40.37
CDX74801	Canola	cytosol	18.8	39.52
CDX80893	Canola	cytosol	12.25	39.45
CDY14169	Canola	cytosol	26.5	37.96
KRH66801	Soybean	plastid	40.17	37.6
CDY70634	Canola	plastid	28.49	37.45
CDY67732	Canola	plastid	27.35	37.07
CDY00113	Canola	cytosol	13.96	36.84
CDX78539	Canola	cytosol, plastid	26.5	35.5
CDX70521	Canola	plastid	26.5	34.7
CDX93821	Canola	cytosol	25.64	34.62
CDY01245	Canola	cytosol	25.07	33.98
CDY59509	Canola	cytosol, plastid	23.36	32.54
CDY70277	Canola	cytosol	30.77	32.05
CDY32696	Canola	cytosol, plastid	22.79	31.87
CDY67051	Canola	cytosol	33.62	31.13
CDX90765	Canola	cytosol	23.65	31.09
CDY05109	Canola	cytosol	23.36	30.94
CDY04039	Canola	cytosol	29.63	30.86
CDY30281	Canola	cytosol	33.9	30.83
CDY32794	Canola	peroxisome	22.51	30.5
CDX74802	Canola	cytosol, mitochondrion	21.37	30.36
CDY20015	Canola	cytosol	33.9	29.46
CDX86410	Canola	cytosol	34.47	29.44
CDY18861	Canola	mitochondrion	20.51	29.27
CDX85224	Canola	cytosol	34.47	29.23
CDX98926	Canola	cytosol	19.94	29.17
CDY67834	Canola	cytosol	19.94	28.93
CDY04902	Canola	nucleus	27.92	28.24
CDX81007	Canola	cytosol, mitochondrion	16.24	25.68
CDY55763	Canola	cytosol, mitochondrion	15.95	25.23
CDY62024	Canola	cytosol	22.79	22.22
CDY47842	Canola	cytosol	22.51	21.94
CDY04838	Canola	mitochondrion	20.51	20.11
CDX80894	Canola	nucleus	9.4	16.84
CDY11275	Canola	nucleus	9.4	16.67

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:A0A078CJ37	EnsemblPlants:CDX76039	ProteinID:CDX76039	ProteinID:CDX76039.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00126269001	InterPro:Glutaredoxin
InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF70	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EEAA32	SEG:seg	:	:	:

Description

BnaA04g03030D

Coordinates

chrLK031806:+:350415..351750

Molecular Weight (calculated)

38659.7 Da

IEP (calculated)

4.618

GRAVY (calculated)

-0.338

Length

351 amino acids

Sequence
(BLAST)

001: MGSSASKTAS STTMSSPSPA IHRAFSFPTP LVHHPPARKG DTHHLVSLTS TSYGSLLLVD LHESKTASDR ISISGPDPVS LDSFSPDSVI NTWELMDGLD
101: DDEEFDPKLC KPISSLDSDL FPKPDPDPNV SALKLDESYE VVRVEQEVEE GWVPLSYKPK QPLWKHLSEE SFLSGLDPSI VSSYKKALPA SALSTTQAKA
201: EDKIVLYFTT LRGIRKTYED CCCVRTILKG FQVTVDERDI SMDSKYRKEL QSTLGDAEKP VCLPQVFIGD THIGGVEEVM KLNDSGELAE MLKGFSVCEC
301: LGTCRSCGDA RFVPCNNCDG STKVFEEEDE MFKRCSKCNE NGLVRCLECC I

Best Arabidopsis Sequence Match ( AT3G57070.1 )
(BLAST)

001: MGSSASKTAS SVSSASSSSA FSPPPTKFSS DSSSPAVQRA FSFPTPLVHH PPARKGDSHH LVSLTSTSYG SLLLLDLDGS KNSSSDQQTL PRISISGKNT
101: PDPVSPDSVI NTWELMDGLD DEFEFEIPKP GKRLNSDFCS KPDPNRNVSL NGSSLKLDES YEIVRIEEDD GDWVPLTYKP KQPLWKHLSE ESFLSDLDPS
201: IVSSYKKALS SKLLSNHSNT RNPHRPTKSL SCSPSSNPSI LISEEPKSVS SSQLISSPAK PRLPGTEDKI VLYFTTLRGI RKTYEDCCCV RAILRGVQVS
301: VDERDISMDS KYRKELQSVL GAAEKPVCLP QVFIRGTHIG GVEEIMQLND GGELAEMLKD FPACERLGTC RSCGDARFVP CTNCDGSTKV FEEQDERFKR
401: CPKCNENGLV RCRVCCL

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9M1J3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.