CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55763	Canola	cytosol, mitochondrion	90.09	90.09
CDX98926	Canola	cytosol	81.08	75.0
AT5G06470.1	Thale cress	cytosol, mitochondrion	80.18	74.48
CDY67834	Canola	cytosol	81.08	74.38
VIT_08s0032g01030.t01	Wine grape	cytosol	38.74	46.99
CDX80893	Canola	cytosol	20.72	42.2
CDY11274	Canola	cytosol	19.37	39.45
KRH72143	Soybean	mitochondrion	43.24	36.36
KRG96283	Soybean	mitochondrion	40.54	35.43
CDY00113	Canola	cytosol	21.17	35.34
KRH68025	Soybean	cytosol	41.44	34.85
KRH32876	Soybean	cytosol	43.24	34.78
Zm00001d012904_P001	Maize	cytosol	18.02	32.26
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	38.29	28.43
Os07t0159900-01	Rice	mitochondrion	31.53	27.34
Zm00001d007885_P001	Maize	mitochondrion	26.58	26.34
CDY01245	Canola	cytosol	30.63	26.25
CDX74801	Canola	cytosol	19.37	25.75
CDX90765	Canola	cytosol	30.63	25.47
CDX93821	Canola	cytosol	29.73	25.38
CDY05109	Canola	cytosol	30.18	25.28
CDY14169	Canola	cytosol	27.48	24.9
EER95886	Sorghum	mitochondrion	30.18	24.45
HORVU2Hr1G059940.1	Barley	mitochondrion	29.73	24.44
CDY59509	Canola	cytosol, plastid	27.48	24.21
TraesCS2A01G249000.1	Wheat	mitochondrion	29.28	24.07
CDY32696	Canola	cytosol, plastid	27.03	23.9
TraesCS2D01G250600.1	Wheat	mitochondrion	28.83	23.7
TraesCS2B01G263800.1	Wheat	mitochondrion	28.83	23.7
CDY32794	Canola	peroxisome	27.03	23.17
CDX78539	Canola	cytosol, plastid	27.03	22.9
CDY67732	Canola	plastid	26.58	22.78
CDX70521	Canola	plastid	27.03	22.39
Zm00001d018827_P001	Maize	mitochondrion	27.03	22.3
CDY70634	Canola	plastid	26.58	22.1
Os03t0648800-00	Rice	mitochondrion	31.08	21.3
CDY18861	Canola	mitochondrion	23.42	21.14
TraesCS5B01G374300.1	Wheat	mitochondrion	29.73	20.95
CDY04902	Canola	nucleus	32.43	20.75
CDY04838	Canola	mitochondrion	33.33	20.67
TraesCS5D01G381700.1	Wheat	mitochondrion	29.73	20.5
CDX74802	Canola	cytosol, mitochondrion	22.52	20.24
TraesCS5A01G372200.1	Wheat	mitochondrion	29.73	20.06
Zm00001d013668_P001	Maize	mitochondrion	31.53	20.0
CDY47842	Canola	cytosol	31.98	19.72
CDY62024	Canola	cytosol	31.53	19.44
EER91159	Sorghum	mitochondrion	30.18	18.82
Zm00001d033205_P001	Maize	mitochondrion	28.83	18.5
CDY70277	Canola	cytosol	27.03	17.8
CDY04039	Canola	cytosol	27.03	17.8
CDY14762	Canola	cytosol, plastid	27.03	16.57
CDY06932	Canola	plastid	27.03	16.3
CDX76039	Canola	plastid	25.68	16.24
HORVU5Hr1G092580.1	Barley	cytosol	17.57	16.12
CDY20015	Canola	cytosol	28.83	15.84
CDY35418	Canola	plastid	27.03	14.96
CDY22520	Canola	plastid	27.03	14.96
CDY06138	Canola	plastid	26.58	14.94
CDX72074	Canola	plastid	26.58	14.82
CDY30970	Canola	plastid	24.32	14.67
CDX86410	Canola	cytosol	27.03	14.6
CDX85224	Canola	cytosol	27.03	14.49
CDY30281	Canola	cytosol	23.87	13.73
CDY67051	Canola	cytosol	23.42	13.72
CDX80894	Canola	nucleus	4.95	5.61
CDY11275	Canola	nucleus	4.95	5.56

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.2	GO:A0A078CW89	EnsemblPlants:CDX81007	ProteinID:CDX81007	ProteinID:CDX81007.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00134439001	InterPro:Glutaredoxin
InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF74	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EF48F0	SEG:seg	:	:	:

Description

BnaC03g02610D

Coordinates

chrLK031823:-:1239903..1240646

Molecular Weight (calculated)

25241.0 Da

IEP (calculated)

4.816

GRAVY (calculated)

-0.628

Length

222 amino acids

Sequence
(BLAST)

001: MKGMKERLAK KIKLITIVST LKQGLAHHRN NVDRTIHHLK EEIVVESGQS RGCVTPTLPE LEDVDEQAQE HDLQEEERGI LLEFEENCPP GGEDSINHKV
101: MYKERDVSMD AEFRDEMWRL LGGKVTSPRL FIRGRYIGGA DEVVALNENG KLKKLLEGIS LVDSPCECCD NERFLICFSC NGSSKLIADH YDDEETSNDD
201: NKMWTRCREC NENGLVKCPL CS

Best Arabidopsis Sequence Match ( AT5G06470.1 )
(BLAST)

001: MKGMKERLVK KIKLITTVKT LKQSLTLHKS TIDRTIHHLR DEIVAESGQS KGCVTPTLLE LEDAEEHNLE EERGILLEFK ENCPPGGEDS VVFYTTGLRS
101: VRKTFEACRR VRFLLENHQV MYRERDVSMD SEFREEMWRL LGGKVTSPRL FIRGRYIGGA EEVVALNENG KLKKLLQGIS QVDSPCESCE NERFLICSSC
201: NGSTRLLAEH HDEESSNDNM WTRCRECNEN GLVKCPLCT

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9FNG2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.