CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000225.1-P	Field mustard	plastid	100.0	100.0
CDY22520	Canola	plastid	97.01	97.01
CDY06932	Canola	plastid	71.82	78.26
CDY14762	Canola	cytosol, plastid	69.58	77.07
AT2G41330.1	Thale cress	plastid	71.82	71.64
CDX76039	Canola	plastid	57.36	65.53
CDY30970	Canola	plastid	58.1	63.32
CDX72074	Canola	plastid	60.35	60.8
CDY06138	Canola	plastid	59.6	60.51
VIT_08s0007g05530.t01	Wine grape	cytosol	33.92	55.51
Solyc04g039900.1.1	Tomato	cytosol, extracellular, nucleus	32.42	47.79
KRG95123	Soybean	plastid	45.89	43.4
CDX74801	Canola	cytosol	17.46	41.92
PGSC0003DMT400007648	Potato	cytosol	40.65	41.16
Solyc10g079560.1.1	Tomato	plastid	44.39	41.01
PGSC0003DMT400020985	Potato	cytosol, plastid	44.14	40.78
CDY11274	Canola	cytosol	10.97	40.37
CDX80893	Canola	cytosol	10.97	40.37
KRH66801	Soybean	plastid	37.41	40.0
CDY70634	Canola	plastid	26.43	39.7
CDY67732	Canola	plastid	25.44	39.38
CDX78539	Canola	cytosol, plastid	25.19	38.55
CDX70521	Canola	plastid	25.19	37.69
CDY00113	Canola	cytosol	12.47	37.59
CDY14169	Canola	cytosol	22.44	36.73
CDX93821	Canola	cytosol	22.69	35.0
CDY01245	Canola	cytosol	22.19	34.36
CDY05109	Canola	cytosol	22.69	34.34
CDX90765	Canola	cytosol	22.69	34.08
CDY59509	Canola	cytosol, plastid	20.2	32.14
CDY32696	Canola	cytosol, plastid	19.7	31.47
CDY70277	Canola	cytosol	26.43	31.45
CDY32794	Canola	peroxisome	20.2	31.27
CDX74802	Canola	cytosol, mitochondrion	19.2	31.17
CDY04039	Canola	cytosol	25.94	30.86
CDY67051	Canola	cytosol	28.93	30.61
CDX98926	Canola	cytosol	18.2	30.42
CDY67834	Canola	cytosol	18.2	30.17
CDY18861	Canola	mitochondrion	18.45	30.08
CDY30281	Canola	cytosol	28.93	30.05
CDX86410	Canola	cytosol	30.17	29.44
CDX85224	Canola	cytosol	30.17	29.23
CDY20015	Canola	cytosol	28.18	27.97
CDY04902	Canola	nucleus	24.19	27.95
CDY55763	Canola	cytosol, mitochondrion	15.21	27.48
CDX81007	Canola	cytosol, mitochondrion	14.96	27.03
CDY47842	Canola	cytosol	21.2	23.61
CDY62024	Canola	cytosol	20.95	23.33
CDY04838	Canola	mitochondrion	20.2	22.63
CDX80894	Canola	nucleus	7.98	16.33
CDY11275	Canola	nucleus	7.98	16.16

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:A0A078HF41	UniProt:A0A078HF41	EnsemblPlants:CDY35418	ProteinID:CDY35418
ProteinID:CDY35418.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00058408001	InterPro:Glutaredoxin	InterPro:IPR002109
PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF70	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0002540348	SEG:seg	:	:	:	:

Description

BnaA03g19420DBnaA03g19420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HF41]

Coordinates

chrLK032351:-:250031..251624

Molecular Weight (calculated)

44362.1 Da

IEP (calculated)

4.913

GRAVY (calculated)

-0.575

Length

401 amino acids

Sequence
(BLAST)

001: MGSSASKTTS SSSCCSASTS PPVTKLNSKV PSPSSPTRVP KAFSFPMPSV HHLPAKEGDT HHLVSLMSTT YGSLHITDLD GASDRQTMPH ISVSGNNNNK
101: KIPEPEESRD SLSPDSVINT WELMNDLDDD YLDNGNDSVL SFSELTADHD VGVNGSALKP DDSYEFVRME EYEEDWIPLP SKTKQPLWKH LAEESFLSDL
201: DPNIISSYKR ALSSKQLGKD TRQTSLLESA RLSSRSLEEQ EKPRLSEAEK DENKIVLYFT SLRGIRKTYE DCCYVRTVLR GYQVAVEERD ISMDSKYRKE
301: LQIALGEEKP VCLPQVFVRG VHIGGMEEIK KLNDGGELGE MLKGLPVCES LGACECCGDA RFVPCTSCGG STKVFEEQED AFKRCNGCNE NGLVRCKKCC
401: L

Best Arabidopsis Sequence Match ( AT2G41330.1 )
(BLAST)

001: MGSSVSKTAS SASASSITSI LNSPPETEFN IPSSSVPKAF TFPMPSIHHP PAKKGDTHHF VSLTSTTYGS LVLDDRQTLP HISVSGKSNK KMPETEEARD
101: SFSPDSVINT WELMNDLDDE FDSANSDTSK SNSVVNLDSF SKPITNRDVV INGSAYGSYE DEEDWRLLPF KPKQPLWKHM SEESFLSDLD PNIISSYKRA
201: LSSKQLGKNS SNGHSNHSVL VSLPEYVSSS PLSSQTSEKD QEKPRLLEKE DNENKIVVYF TSLRGIRKTY EDCCCVRAIL RGFQVAVEER DISMDSKYRK
301: ELQNALGEEK PVCLPQVFIR GVRIGGIEEI KILNDGGELA EMLKDFPACE SIGACDSCGD ARFVPCTNCG GSTKVFEEQE DGFKRCNGCN ENGLVRCNKC
401: CL

Arabidopsis Description

At2g41330/F13H10.12 [Source:UniProtKB/TrEMBL;Acc:Q9ZVB8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.