Factsheet for AT2G41330.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14762	Canola	cytosol, plastid	66.17	73.48
CDY06932	Canola	plastid	66.67	72.83
Bra016941.1-P	Field mustard	plastid	66.42	72.55
CDY35418	Canola	plastid	71.64	71.82
Bra000225.1-P	Field mustard	plastid	71.64	71.82
CDY22520	Canola	plastid	71.14	71.32
AT3G57070.1	Thale cress	plastid	64.93	62.59
VIT_08s0007g05530.t01	Wine grape	cytosol	33.83	55.51
Solyc04g039900.1.1	Tomato	cytosol, extracellular, nucleus	33.58	49.63
KRG95123	Soybean	plastid	47.51	45.05
PGSC0003DMT400007648	Potato	cytosol	42.54	43.18
Solyc10g079560.1.1	Tomato	plastid	45.27	41.94
PGSC0003DMT400020985	Potato	cytosol, plastid	45.02	41.71
AT5G13810.1	Thale cress	plastid	28.36	41.61
KRH66801	Soybean	plastid	38.06	40.8
AT1G32760.1	Thale cress	plastid	24.13	30.89
AT5G58530.1	Thale cress	cytosol, plastid	20.9	30.77
AT5G06470.1	Thale cress	cytosol, mitochondrion	18.16	30.54
AT5G39865.1	Thale cress	cytosol, mitochondrion	28.86	29.74
AT4G10630.1	Thale cress	cytosol	23.38	28.14
AT5G03870.1	Thale cress	cytosol	25.37	26.56
AT3G28850.1	Thale cress	cytosol	28.11	26.4
AT3G11773.2	Thale cress	cytosol	12.44	25.0
AT1G64500.1	Thale cress	cytosol	19.4	21.2
AT5G01420.1	Thale cress	cytosol	19.15	19.2

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:818731	UniProt:A0A178VSA3	ProteinID:AAC78540.1	ProteinID:AEC09960.1
EMBL:AK221514	ArrayExpress:AT2G41330	EnsemblPlantsGene:AT2G41330	RefSeq:AT2G41330	TAIR:AT2G41330	RefSeq:AT2G41330-TAIR-G
EnsemblPlants:AT2G41330.1	TAIR:AT2G41330.1	EMBL:AY074644	Unigene:At.37020	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114
InterPro:Glutaredoxin	InterPro:IPR002109	RefSeq:NP_181664.1	ProteinID:OAP07722.1	PFAM:PF00462	PO:PO:0000013
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF70	UniProt:Q9ZVB8	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI000009E76A	SEG:seg	:	:	:

Description

At2g41330/F13H10.12 [Source:UniProtKB/TrEMBL;Acc:Q9ZVB8]

Coordinates

chr2:+:17226948..17228519

Molecular Weight (calculated)

44389.9 Da

IEP (calculated)

4.952

GRAVY (calculated)

-0.546

Length

402 amino acids

Sequence
(BLAST)

001: MGSSVSKTAS SASASSITSI LNSPPETEFN IPSSSVPKAF TFPMPSIHHP PAKKGDTHHF VSLTSTTYGS LVLDDRQTLP HISVSGKSNK KMPETEEARD
101: SFSPDSVINT WELMNDLDDE FDSANSDTSK SNSVVNLDSF SKPITNRDVV INGSAYGSYE DEEDWRLLPF KPKQPLWKHM SEESFLSDLD PNIISSYKRA
201: LSSKQLGKNS SNGHSNHSVL VSLPEYVSSS PLSSQTSEKD QEKPRLLEKE DNENKIVVYF TSLRGIRKTY EDCCCVRAIL RGFQVAVEER DISMDSKYRK
301: ELQNALGEEK PVCLPQVFIR GVRIGGIEEI KILNDGGELA EMLKDFPACE SIGACDSCGD ARFVPCTNCG GSTKVFEEQE DGFKRCNGCN ENGLVRCNKC
401: CL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.