Factsheet for Bra000225.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35418	Canola	plastid	100.0	100.0
Bra016941.1-P	Field mustard	plastid	71.32	77.72
AT2G41330.1	Thale cress	plastid	71.82	71.64
Bra007299.1-P	Field mustard	plastid	59.6	60.51
Bra014646.1-P	Field mustard	plastid	57.36	58.52
VIT_08s0007g05530.t01	Wine grape	cytosol	33.92	55.51
Solyc04g039900.1.1	Tomato	cytosol, extracellular, nucleus	32.42	47.79
KRG95123	Soybean	plastid	45.89	43.4
PGSC0003DMT400007648	Potato	cytosol	40.65	41.16
Solyc10g079560.1.1	Tomato	plastid	44.39	41.01
PGSC0003DMT400020985	Potato	cytosol, plastid	44.14	40.78
Bra005786.1-P	Field mustard	cytosol	10.97	40.37
KRH66801	Soybean	plastid	37.41	40.0
Bra002640.1-P	Field mustard	cytosol	11.72	39.83
Bra008801.1-P	Field mustard	plastid	26.18	39.33
Bra006216.1-P	Field mustard	plastid	24.94	37.88
Bra020363.1-P	Field mustard	cytosol, plastid	20.2	32.14
Bra033062.1-P	Field mustard	cytosol	26.43	31.45
Bra004972.1-P	Field mustard	mitochondrion	19.2	31.17
Bra009197.1-P	Field mustard	cytosol	18.7	30.99
Bra000716.1-P	Field mustard	cytosol	23.94	30.97
Bra023284.1-P	Field mustard	cytosol	22.69	30.33
Bra005898.1-P	Field mustard	cytosol, mitochondrion	18.45	29.96
Bra025357.1-P	Field mustard	cytosol	30.17	29.44
Bra025638.1-P	Field mustard	cytosol	29.93	29.27
Bra004971.1-P	Field mustard	plastid	18.45	29.25
Bra028812.1-P	Field mustard	nucleus	24.19	27.79
Bra039044.1-P	Field mustard	cytosol	28.93	27.49
Bra040917.1-P	Field mustard	cytosol	21.2	23.61
Bra028902.1-P	Field mustard	mitochondrion	19.95	22.35

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EnsemblPlantsGene:Bra000225	EnsemblPlants:Bra000225.1	EnsemblPlants:Bra000225.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4C7P7	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF70	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002540348	SEG:seg

Description

AT2G41330 (E=7e-131) | glutaredoxin family protein

Coordinates

chrA03:+:10004744..10006120

Molecular Weight (calculated)

44362.1 Da

IEP (calculated)

4.913

GRAVY (calculated)

-0.575

Length

401 amino acids

Sequence
(BLAST)

001: MGSSASKTTS SSSCCSASTS PPVTKLNSKV PSPSSPTRVP KAFSFPMPSV HHLPAKEGDT HHLVSLMSTT YGSLHITDLD GASDRQTMPH ISVSGNNNNK
101: KIPEPEESRD SLSPDSVINT WELMNDLDDD YLDNGNDSVL SFSELTADHD VGVNGSALKP DDSYEFVRME EYEEDWIPLP SKTKQPLWKH LAEESFLSDL
201: DPNIISSYKR ALSSKQLGKD TRQTSLLESA RLSSRSLEEQ EKPRLSEAEK DENKIVLYFT SLRGIRKTYE DCCYVRTVLR GYQVAVEERD ISMDSKYRKE
301: LQIALGEEKP VCLPQVFVRG VHIGGMEEIK KLNDGGELGE MLKGLPVCES LGACECCGDA RFVPCTSCGG STKVFEEQED AFKRCNGCNE NGLVRCKKCC
401: L

Best Arabidopsis Sequence Match ( AT2G41330.1 )
(BLAST)

001: MGSSVSKTAS SASASSITSI LNSPPETEFN IPSSSVPKAF TFPMPSIHHP PAKKGDTHHF VSLTSTTYGS LVLDDRQTLP HISVSGKSNK KMPETEEARD
101: SFSPDSVINT WELMNDLDDE FDSANSDTSK SNSVVNLDSF SKPITNRDVV INGSAYGSYE DEEDWRLLPF KPKQPLWKHM SEESFLSDLD PNIISSYKRA
201: LSSKQLGKNS SNGHSNHSVL VSLPEYVSSS PLSSQTSEKD QEKPRLLEKE DNENKIVVYF TSLRGIRKTY EDCCCVRAIL RGFQVAVEER DISMDSKYRK
301: ELQNALGEEK PVCLPQVFIR GVRIGGIEEI KILNDGGELA EMLKDFPACE SIGACDSCGD ARFVPCTNCG GSTKVFEEQE DGFKRCNGCN ENGLVRCNKC
401: CL

Arabidopsis Description

At2g41330/F13H10.12 [Source:UniProtKB/TrEMBL;Acc:Q9ZVB8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.