Factsheet for Bra007299.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06138	Canola	plastid	99.49	99.49
AT3G57070.1	Thale cress	plastid	80.76	76.5
Bra014646.1-P	Field mustard	plastid	73.16	73.54
Bra016941.1-P	Field mustard	plastid	56.71	60.87
Bra000225.1-P	Field mustard	plastid	60.51	59.6
VIT_08s0007g05530.t01	Wine grape	cytosol	34.43	55.51
Solyc04g039900.1.1	Tomato	cytosol, extracellular, nucleus	34.43	50.0
KRG95123	Soybean	plastid	51.14	47.64
KRH66801	Soybean	plastid	42.03	44.27
PGSC0003DMT400007648	Potato	cytosol	43.04	42.93
Solyc10g079560.1.1	Tomato	plastid	46.58	42.4
PGSC0003DMT400020985	Potato	cytosol, plastid	46.58	42.4
Bra005786.1-P	Field mustard	cytosol	11.65	42.2
Bra008801.1-P	Field mustard	plastid	27.85	41.2
Bra006216.1-P	Field mustard	plastid	26.08	39.02
Bra002640.1-P	Field mustard	cytosol	11.65	38.98
Bra020363.1-P	Field mustard	cytosol, plastid	21.01	32.94
Bra033062.1-P	Field mustard	cytosol	27.34	32.05
Bra004972.1-P	Field mustard	mitochondrion	19.49	31.17
Bra023284.1-P	Field mustard	cytosol	23.54	31.0
Bra009197.1-P	Field mustard	cytosol	18.73	30.58
Bra000716.1-P	Field mustard	cytosol	23.8	30.32
Bra025638.1-P	Field mustard	cytosol	31.14	30.0
Bra028812.1-P	Field mustard	nucleus	26.33	29.8
Bra005898.1-P	Field mustard	cytosol, mitochondrion	18.48	29.55
Bra025357.1-P	Field mustard	cytosol	30.63	29.44
Bra039044.1-P	Field mustard	cytosol	31.14	29.15
Bra004971.1-P	Field mustard	plastid	18.48	28.85
Bra040917.1-P	Field mustard	cytosol	21.01	23.06
Bra028902.1-P	Field mustard	mitochondrion	19.24	21.23

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EnsemblPlantsGene:Bra007299	EnsemblPlants:Bra007299.1	EnsemblPlants:Bra007299.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4CSV7	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF70	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002542C7B	SEG:seg

Description

AT3G57070 (E=3e-150) | glutaredoxin family protein

Coordinates

chrA09:+:28458331..28459518

Molecular Weight (calculated)

43376.2 Da

IEP (calculated)

6.501

GRAVY (calculated)

-0.512

Length

395 amino acids

Sequence
(BLAST)

001: MGSSTSKTSS SASSTSVSSS FVAASDSPSP AIHKAFSFPT PLVHHPPARK GDTHHLVSLT STSYGSLLLK SSSDQETPPR ISISDKNTTD PVSRDSFSPD
101: SVINTWELMD GLDDEFEFEI AKPGKLGSGQ DSDLCPKPDP NRNGSALKLD ESYEFVRTGQ EEEDWVPLSY KPKQPLWKHL SEESFLSGLD PSIVSSYKKA
201: LSSKQLTNHS VDTRKPLTTT KSLSFITSEP KSVCAKPRLQ GAEDKIVLYF TTLRGIRKTY EDCCCVRMIL KGLQVAVDER DISMDSKYRK ELQSLLGAGE
301: KPKPVCLPQV FIRGSHIGGV EEIMKLNDSG ELAEMLKDFP ACECLGTCRS CGDARFVPCS NCDGSTKVFG EEEERFKRCP KCNENGLVRC RQCSV

Best Arabidopsis Sequence Match ( AT3G57070.1 )
(BLAST)

001: MGSSASKTAS SVSSASSSSA FSPPPTKFSS DSSSPAVQRA FSFPTPLVHH PPARKGDSHH LVSLTSTSYG SLLLLDLDGS KNSSSDQQTL PRISISGKNT
101: PDPVSPDSVI NTWELMDGLD DEFEFEIPKP GKRLNSDFCS KPDPNRNVSL NGSSLKLDES YEIVRIEEDD GDWVPLTYKP KQPLWKHLSE ESFLSDLDPS
201: IVSSYKKALS SKLLSNHSNT RNPHRPTKSL SCSPSSNPSI LISEEPKSVS SSQLISSPAK PRLPGTEDKI VLYFTTLRGI RKTYEDCCCV RAILRGVQVS
301: VDERDISMDS KYRKELQSVL GAAEKPVCLP QVFIRGTHIG GVEEIMQLND GGELAEMLKD FPACERLGTC RSCGDARFVP CTNCDGSTKV FEEQDERFKR
401: CPKCNENGLV RCRVCCL

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9M1J3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.