Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06138 | Canola | plastid | 76.74 | 81.01 |
| Bra007299.1-P | Field mustard | plastid | 76.5 | 80.76 |
| CDX72074 | Canola | plastid | 76.74 | 80.4 |
| CDY30970 | Canola | plastid | 69.54 | 78.8 |
| CDX76039 | Canola | plastid | 65.47 | 77.78 |
| Bra014646.1-P | Field mustard | plastid | 66.91 | 70.99 |
| AT2G41330.1 | Thale cress | plastid | 62.59 | 64.93 |
| VIT_08s0007g05530.t01 | Wine grape | cytosol | 33.33 | 56.73 |
| Solyc04g039900.1.1 | Tomato | cytosol, extracellular, nucleus | 32.61 | 50.0 |
| KRG95123 | Soybean | plastid | 48.68 | 47.88 |
| KRH66801 | Soybean | plastid | 40.29 | 44.8 |
| PGSC0003DMT400020985 | Potato | cytosol, plastid | 46.04 | 44.24 |
| Solyc10g079560.1.1 | Tomato | plastid | 45.8 | 44.01 |
| PGSC0003DMT400007648 | Potato | cytosol | 41.25 | 43.43 |
| AT5G13810.1 | Thale cress | plastid | 27.58 | 41.97 |
| AT5G39865.1 | Thale cress | cytosol, mitochondrion | 30.22 | 32.31 |
| AT5G58530.1 | Thale cress | cytosol, plastid | 21.1 | 32.23 |
| AT5G06470.1 | Thale cress | cytosol, mitochondrion | 17.99 | 31.38 |
| AT1G32760.1 | Thale cress | plastid | 22.78 | 30.25 |
| AT3G28850.1 | Thale cress | cytosol | 30.22 | 29.44 |
| AT4G10630.1 | Thale cress | cytosol | 22.54 | 28.14 |
| AT5G03870.1 | Thale cress | cytosol | 25.9 | 28.12 |
| AT3G11773.2 | Thale cress | cytosol | 11.99 | 25.0 |
| AT1G64500.1 | Thale cress | cytosol | 19.42 | 22.01 |
| AT5G01420.1 | Thale cress | cytosol | 19.9 | 20.7 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | EntrezGene:824874 | UniProt:A0A178VF27 | ProteinID:AEE79610.1 | ArrayExpress:AT3G57070 |
| EnsemblPlantsGene:AT3G57070 | RefSeq:AT3G57070 | TAIR:AT3G57070 | RefSeq:AT3G57070-TAIR-G | EnsemblPlants:AT3G57070.1 | TAIR:AT3G57070.1 |
| Unigene:At.21474 | ProteinID:CAB72177.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:Glutaredoxin | InterPro:IPR002109 |
| RefSeq:NP_567043.2 | ProteinID:OAP03573.1 | PFAM:PF00462 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51354 | PANTHER:PTHR10168 |
| PANTHER:PTHR10168:SF70 | UniProt:Q9M1J3 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI00000A33AC | SEG:seg |
Description
Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9M1J3]
Coordinates
chr3:+:21123859..21125682
Molecular Weight (calculated)
45720.8 Da
IEP (calculated)
6.501
GRAVY (calculated)
-0.502
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSASKTAS SVSSASSSSA FSPPPTKFSS DSSSPAVQRA FSFPTPLVHH PPARKGDSHH LVSLTSTSYG SLLLLDLDGS KNSSSDQQTL PRISISGKNT
101: PDPVSPDSVI NTWELMDGLD DEFEFEIPKP GKRLNSDFCS KPDPNRNVSL NGSSLKLDES YEIVRIEEDD GDWVPLTYKP KQPLWKHLSE ESFLSDLDPS
201: IVSSYKKALS SKLLSNHSNT RNPHRPTKSL SCSPSSNPSI LISEEPKSVS SSQLISSPAK PRLPGTEDKI VLYFTTLRGI RKTYEDCCCV RAILRGVQVS
301: VDERDISMDS KYRKELQSVL GAAEKPVCLP QVFIRGTHIG GVEEIMQLND GGELAEMLKD FPACERLGTC RSCGDARFVP CTNCDGSTKV FEEQDERFKR
401: CPKCNENGLV RCRVCCL
101: PDPVSPDSVI NTWELMDGLD DEFEFEIPKP GKRLNSDFCS KPDPNRNVSL NGSSLKLDES YEIVRIEEDD GDWVPLTYKP KQPLWKHLSE ESFLSDLDPS
201: IVSSYKKALS SKLLSNHSNT RNPHRPTKSL SCSPSSNPSI LISEEPKSVS SSQLISSPAK PRLPGTEDKI VLYFTTLRGI RKTYEDCCCV RAILRGVQVS
301: VDERDISMDS KYRKELQSVL GAAEKPVCLP QVFIRGTHIG GVEEIMQLND GGELAEMLKD FPACERLGTC RSCGDARFVP CTNCDGSTKV FEEQDERFKR
401: CPKCNENGLV RCRVCCL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.