CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76039	Canola	plastid	87.23	91.45
CDY06138	Canola	plastid	79.35	73.92
CDX72074	Canola	plastid	78.8	72.86
AT3G57070.1	Thale cress	plastid	78.8	69.54
CDY06932	Canola	plastid	58.42	58.42
CDY35418	Canola	plastid	63.32	58.1
CDY14762	Canola	cytosol, plastid	56.79	57.73
CDY22520	Canola	plastid	62.23	57.11
VIT_08s0007g05530.t01	Wine grape	cytosol	35.6	53.47
Solyc04g039900.1.1	Tomato	cytosol, extracellular, nucleus	35.87	48.53
KRG95123	Soybean	plastid	50.0	43.4
PGSC0003DMT400020985	Potato	cytosol, plastid	49.18	41.71
Solyc10g079560.1.1	Tomato	plastid	49.18	41.71
CDX74801	Canola	cytosol	18.48	40.72
PGSC0003DMT400007648	Potato	cytosol	43.48	40.4
CDX80893	Canola	cytosol	11.68	39.45
CDY11274	Canola	cytosol	11.68	39.45
KRH66801	Soybean	plastid	39.67	38.93
CDY70634	Canola	plastid	27.45	37.83
CDY14169	Canola	cytosol	25.0	37.55
CDY67732	Canola	plastid	26.36	37.45
CDY00113	Canola	cytosol	13.32	36.84
CDX78539	Canola	cytosol, plastid	25.54	35.88
CDX70521	Canola	plastid	25.54	35.07
CDX93821	Canola	cytosol	24.73	35.0
CDY01245	Canola	cytosol	24.18	34.36
CDY59509	Canola	cytosol, plastid	22.55	32.94
CDY32696	Canola	cytosol, plastid	22.01	32.27
CDY70277	Canola	cytosol	28.8	31.45
CDY32794	Canola	peroxisome	22.01	31.27
CDX74802	Canola	cytosol, mitochondrion	20.92	31.17
CDX90765	Canola	cytosol	22.55	31.09
CDY05109	Canola	cytosol	22.28	30.94
CDY67051	Canola	cytosol	31.79	30.87
CDY30281	Canola	cytosol	32.34	30.83
CDY04039	Canola	cytosol	27.99	30.56
CDY18861	Canola	mitochondrion	20.11	30.08
CDY20015	Canola	cytosol	32.61	29.7
CDX86410	Canola	cytosol	32.88	29.44
CDX85224	Canola	cytosol	32.88	29.23
CDX98926	Canola	cytosol	18.48	28.33
CDY04902	Canola	nucleus	26.63	28.24
CDY67834	Canola	cytosol	18.48	28.1
CDY55763	Canola	cytosol, mitochondrion	14.67	24.32
CDX81007	Canola	cytosol, mitochondrion	14.67	24.32
CDY62024	Canola	cytosol	21.47	21.94
CDY47842	Canola	cytosol	20.92	21.39
CDY04838	Canola	mitochondrion	19.84	20.39
CDX80894	Canola	nucleus	9.24	17.35
CDY11275	Canola	nucleus	9.24	17.17

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:A0A078GWW0	UniProt:A0A078GWW0	EnsemblPlants:CDY30970	ProteinID:CDY30970
ProteinID:CDY30970.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00046993001	InterPro:Glutaredoxin	InterPro:IPR002109
PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF70	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0004EDFC78	SEG:seg	:	:	:	:

Description

BnaC04g24540DBnaC04g24540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWW0]

Coordinates

chrLK032265:+:114114..115343

Molecular Weight (calculated)

40419.8 Da

IEP (calculated)

4.625

GRAVY (calculated)

-0.336

Length

368 amino acids

Sequence
(BLAST)

001: MGSSASKTAS STTMSSPSPA IHRAFSFPTP LVHHPPARKG DTHHLVSLTS TSYGSLLLID LEGSKTASDR ISISGPDPVS LDSFSPDSVI NTWELMDGLD
101: DDEFEFECPK LGKPISNSDL CPKPDPDPNV SALKLDESYE VVRVEQEVEE GWVPLSYKPK QPLWKHLSEE SFLSGLDPSI VSSYKKPLSS KQLSNDSINV
201: EVISPPSSAL STTQAKAEDK IVLYFTTLRG IRKTYENCCC VRTILRGFQV TVDERDISMD SKYRKELQSM VGDAEKPVCL PQVFIGDTHI GGVEEIMKLN
301: DSGELVEMLK GFPACECLGT CKSCGDARFV PCSNCDGSTK VFEEEDEMFK RCSKCNENGL VRCLECCL

Best Arabidopsis Sequence Match ( AT3G57070.1 )
(BLAST)

001: MGSSASKTAS SVSSASSSSA FSPPPTKFSS DSSSPAVQRA FSFPTPLVHH PPARKGDSHH LVSLTSTSYG SLLLLDLDGS KNSSSDQQTL PRISISGKNT
101: PDPVSPDSVI NTWELMDGLD DEFEFEIPKP GKRLNSDFCS KPDPNRNVSL NGSSLKLDES YEIVRIEEDD GDWVPLTYKP KQPLWKHLSE ESFLSDLDPS
201: IVSSYKKALS SKLLSNHSNT RNPHRPTKSL SCSPSSNPSI LISEEPKSVS SSQLISSPAK PRLPGTEDKI VLYFTTLRGI RKTYEDCCCV RAILRGVQVS
301: VDERDISMDS KYRKELQSVL GAAEKPVCLP QVFIRGTHIG GVEEIMQLND GGELAEMLKD FPACERLGTC RSCGDARFVP CTNCDGSTKV FEEQDERFKR
401: CPKCNENGLV RCRVCCL

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9M1J3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.