Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01245 | Canola | cytosol | 96.15 | 96.53 |
| Bra023284.1-P | Field mustard | cytosol | 96.92 | 84.0 |
| AT1G32760.1 | Thale cress | plastid | 76.54 | 63.38 |
| CDY05109 | Canola | cytosol | 62.31 | 61.13 |
| CDX90765 | Canola | cytosol | 62.69 | 61.05 |
| KRH41800 | Soybean | cytosol | 61.92 | 59.63 |
| CDY11274 | Canola | cytosol | 22.69 | 54.13 |
| CDX80893 | Canola | cytosol | 22.31 | 53.21 |
| VIT_02s0025g02700.t01 | Wine grape | cytosol | 61.54 | 51.78 |
| Solyc08g083270.1.1 | Tomato | cytosol | 57.69 | 45.87 |
| PGSC0003DMT400031889 | Potato | plastid | 53.08 | 44.09 |
| CDY14169 | Canola | cytosol | 40.0 | 42.45 |
| TraesCS1A01G103100.1 | Wheat | cytosol | 49.23 | 42.11 |
| TraesCS1D01G095500.1 | Wheat | cytosol | 49.62 | 42.02 |
| Zm00001d054094_P001 | Maize | cytosol | 50.38 | 41.99 |
| TraesCS1B01G114500.1 | Wheat | cytosol | 49.62 | 41.75 |
| HORVU1Hr1G021100.2 | Barley | cytosol | 49.23 | 41.16 |
| KXG29248 | Sorghum | cytosol | 49.62 | 39.21 |
| CDX74801 | Canola | cytosol | 23.85 | 37.13 |
| CDY00113 | Canola | cytosol | 18.08 | 35.34 |
| CDY67834 | Canola | cytosol | 30.38 | 32.64 |
| CDX98926 | Canola | cytosol | 30.0 | 32.5 |
| CDY04902 | Canola | nucleus | 42.31 | 31.7 |
| Os02t0102000-00 | Rice | cytosol | 39.23 | 31.68 |
| CDX81007 | Canola | cytosol, mitochondrion | 25.38 | 29.73 |
| CDY55763 | Canola | cytosol, mitochondrion | 25.38 | 29.73 |
| CDY32794 | Canola | peroxisome | 28.85 | 28.96 |
| CDY32696 | Canola | cytosol, plastid | 27.69 | 28.69 |
| CDY59509 | Canola | cytosol, plastid | 27.69 | 28.57 |
| CDY67732 | Canola | plastid | 27.69 | 27.8 |
| CDY70634 | Canola | plastid | 28.08 | 27.34 |
| CDY47842 | Canola | cytosol | 37.69 | 27.22 |
| CDX78539 | Canola | cytosol, plastid | 27.31 | 27.1 |
| CDY04039 | Canola | cytosol | 34.62 | 26.71 |
| CDY62024 | Canola | cytosol | 36.92 | 26.67 |
| CDX70521 | Canola | plastid | 27.31 | 26.49 |
| CDX74802 | Canola | cytosol, mitochondrion | 25.0 | 26.32 |
| CDY70277 | Canola | cytosol | 33.85 | 26.11 |
| CDX76039 | Canola | plastid | 34.62 | 25.64 |
| CDY18861 | Canola | mitochondrion | 24.23 | 25.61 |
| CDY04838 | Canola | mitochondrion | 34.62 | 25.14 |
| CDY06932 | Canola | plastid | 35.38 | 25.0 |
| CDY30970 | Canola | plastid | 35.0 | 24.73 |
| CDY30281 | Canola | cytosol | 36.54 | 24.61 |
| CDY67051 | Canola | cytosol | 35.77 | 24.54 |
| CDY14762 | Canola | cytosol, plastid | 33.85 | 24.31 |
| CDY06138 | Canola | plastid | 36.15 | 23.8 |
| CDX72074 | Canola | plastid | 35.77 | 23.37 |
| CDX85224 | Canola | cytosol | 36.54 | 22.95 |
| CDX86410 | Canola | cytosol | 36.15 | 22.87 |
| CDY20015 | Canola | cytosol | 35.38 | 22.77 |
| CDY22520 | Canola | plastid | 35.0 | 22.69 |
| CDY35418 | Canola | plastid | 35.0 | 22.69 |
| CDY11275 | Canola | nucleus | 12.69 | 16.67 |
| CDX80894 | Canola | nucleus | 12.31 | 16.33 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | GO:A0A078DX00 | EnsemblPlants:CDX93821 | ProteinID:CDX93821 | ProteinID:CDX93821.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:GSBRNA2T00156599001 | InterPro:Glutaredoxin |
| InterPro:IPR002109 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF79 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI0004EE76BC | SEG:seg | : | : | : |
Description
BnaA09g24210D
Coordinates
chrLK031877:-:1197393..1198701
Molecular Weight (calculated)
28135.9 Da
IEP (calculated)
5.150
GRAVY (calculated)
-0.057
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCVSSNLLN QSDDFSQLAV CHHHLVQLTS STYGLLNLDP PPPPSSSVIS APATPMTPPE KRFTFVGKEP ITVKSEPEVI NFWELMSGLD ADTCRFSPLP
101: KLCPPGDGGD NRVVIYTTSL RGVRRTFDAC NAVRAAIESF GVVICERDIS MDRGFREELT SLMSGESVLP PRVFVKGRYI GGVEEVMNLV EEGLLRDLLR
201: GIPRRKDRGG GCDGCGGLSF FPCSECNGSC KVVDGWGSDV VVVRCNKCNE NGLVLCPICS
101: KLCPPGDGGD NRVVIYTTSL RGVRRTFDAC NAVRAAIESF GVVICERDIS MDRGFREELT SLMSGESVLP PRVFVKGRYI GGVEEVMNLV EEGLLRDLLR
201: GIPRRKDRGG GCDGCGGLSF FPCSECNGSC KVVDGWGSDV VVVRCNKCNE NGLVLCPICS
001: MGGCVSSNLL TPTDDSSFSH LTSSSLSQHF VKLTSTTYGL LNLDSSSPSP PSPSSSSSAK SVITPMTPPE RFTINGKEAA MMMVKSEPTT EVINFWELMS
101: GLDGDTCRFS PIPVKCNGFS GGLKKENSDP NLKNPNDYEV LKPLDPKLAE ESERLCDGGE NRVVIYTTSL RGVRRTFEAC NAVRAAIESF GVVVCERDVS
201: MDRGFREELS NLMAVESTAA VLPPRVFVKG KYIGGAEEVM RLVEEGLLGE LLKEIPRKKD RCGGGCGGCG GLAFLPCSGC NGSCKVVEGW GNDAVVVKCK
301: ECNENGLVRC PICS
101: GLDGDTCRFS PIPVKCNGFS GGLKKENSDP NLKNPNDYEV LKPLDPKLAE ESERLCDGGE NRVVIYTTSL RGVRRTFEAC NAVRAAIESF GVVVCERDVS
201: MDRGFREELS NLMAVESTAA VLPPRVFVKG KYIGGAEEVM RLVEEGLLGE LLKEIPRKKD RCGGGCGGCG GLAFLPCSGC NGSCKVVEGW GNDAVVVKCK
301: ECNENGLVRC PICS
Arabidopsis Description
At1g32760 [Source:UniProtKB/TrEMBL;Acc:Q9LPI8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.