Factsheet for Solyc08g083270.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400031889	Potato	plastid	88.69	92.65
VIT_02s0025g02700.t01	Wine grape	cytosol	62.39	66.02
KRH41800	Soybean	cytosol	51.68	62.59
CDX93821	Canola	cytosol	45.87	57.69
CDY01245	Canola	cytosol	45.57	57.53
CDY05109	Canola	cytosol	45.87	56.6
CDX90765	Canola	cytosol	46.18	56.55
Bra000716.1-P	Field mustard	cytosol	51.07	53.87
Bra023284.1-P	Field mustard	cytosol	47.4	51.67
AT4G10630.1	Thale cress	cytosol	52.6	51.5
AT1G32760.1	Thale cress	plastid	46.48	48.41
TraesCS1A01G103100.1	Wheat	cytosol	41.28	44.41
TraesCS1D01G095500.1	Wheat	cytosol	41.59	44.3
TraesCS1B01G114500.1	Wheat	cytosol	41.59	44.01
HORVU1Hr1G021100.2	Barley	cytosol	40.98	43.09
Zm00001d054094_P001	Maize	cytosol	38.84	40.71
KXG29248	Sorghum	cytosol	39.14	38.91
Solyc11g005270.1.1	Tomato	cytosol	20.49	35.26
Solyc09g009860.1.1	Tomato	cytosol	37.92	31.08
Solyc03g078380.1.1	Tomato	cytosol	24.77	31.03
Os02t0102000-00	Rice	cytosol	29.97	30.43
Solyc06g082180.1.1	Tomato	cytosol, plastid	23.24	29.92
Solyc04g039900.1.1	Tomato	cytosol, extracellular, nucleus	23.85	28.68
Solyc02g067400.1.1	Tomato	cytosol	23.85	27.46
Solyc11g006430.1.1	Tomato	cytosol	29.66	26.87
Solyc08g082590.2.1	Tomato	cytosol	30.89	25.7
Solyc02g087850.1.1	Tomato	cytosol, plastid	31.8	24.82
Solyc10g079560.1.1	Tomato	plastid	31.8	23.96
Solyc06g082170.2.1	Tomato	cytosol, plastid	21.71	17.11

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	UniProt:G8Z252	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EMBL:GQ261230
InterPro:Glutaredoxin	InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF79
SUPFAM:SSF52833	EnsemblPlantsGene:Solyc08g083270.1	EnsemblPlants:Solyc08g083270.1.1	InterPro:Thioredoxin-like_sf	UniParc:UPI000243C62B	SEG:seg

Description

Hop-interacting protein THI143 [Source:UniProtKB/TrEMBL;Acc:G8Z252]

Coordinates

chr8:+:65775814..65776797

Molecular Weight (calculated)

35689.9 Da

IEP (calculated)

6.145

GRAVY (calculated)

-0.194

Length

327 amino acids

Sequence
(BLAST)

001: MGCVSSTLLN QENEFTQMGG SAAGFSHHIV SLTSTTYGLL TLDPPSTPPP ITVPPTPTLP PRHTLGSLVP SPLFEPRILK SDIINSWELM AGLDSTSTTP
101: ISDSFRFLSL RKSTPDSSFR FLRSSPNKEN SSPNIPSFTH ALDKTDIFNP TRLSSASVLD GFERICPPNG DDKIVIYTTT LRGVRKTFEA CNAVRSAIEG
201: LGVLYSERDI SMDKGFREEL KQLMKGKEST ELIPPRVFFK GRYIGGAEEV MRIVEEGNFG DLLQGLPKMK AGSVCEGCGG IRFMPCFTCN GSCKMVKEDV
301: EQNEGRAVVV RCSECNENGL VLCPICC

Best Arabidopsis Sequence Match ( AT4G10630.1 )
(BLAST)

001: MGCVSSNLLN HDEDFSQIGG GSSAFGHHIV KLTSTTYGLL TLDPPPPPSP PMTPPEKFTV DTKSKSIWSE PRVIKSEPEI INSWELMSGL DGESFRFTPL
101: PKTPVKYKVF GGENKENSDP SRRNPRKNLN DEVLKPLDLN REDSDSNSRS PRKSFKPLDL KLDEKFERIC PPGGENRVVM YTTSLRGVRQ TFEACNAVRA
201: AVESFGVVVC ERDVSMDRRF REELVSLMAK RVGDEGVAAL PPRVFVKGRY IGGGEEVLRL VEEGSFGELI SGIPRKKAGG CESGACDGCG GLFFLPCFRC
301: NGSCKMVKGW GSASVVVRCN ECNENGLVPC PICS

Arabidopsis Description

F3H7.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZSB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.