CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01245	Canola	cytosol	60.0	62.55
CDY05109	Canola	cytosol	61.11	62.26
CDX93821	Canola	cytosol	59.63	61.92
CDX90765	Canola	cytosol	60.74	61.42
VIT_02s0025g02700.t01	Wine grape	cytosol	67.04	58.58
Bra000716.1-P	Field mustard	cytosol	65.56	57.1
Bra023284.1-P	Field mustard	cytosol	60.37	54.33
AT1G32760.1	Thale cress	plastid	61.48	52.87
AT4G10630.1	Thale cress	cytosol	64.07	51.8
Solyc08g083270.1.1	Tomato	cytosol	62.59	51.68
PGSC0003DMT400031889	Potato	plastid	58.15	50.16
TraesCS1A01G103100.1	Wheat	cytosol	48.15	42.76
TraesCS1D01G095500.1	Wheat	cytosol	48.15	42.35
TraesCS1B01G114500.1	Wheat	cytosol	48.15	42.07
Zm00001d054094_P001	Maize	cytosol	48.52	41.99
HORVU1Hr1G021100.2	Barley	cytosol	47.78	41.48
KXG29248	Sorghum	cytosol	47.04	38.6
KRH72143	Soybean	mitochondrion	33.33	34.09
KRH31178	Soybean	plastid	28.15	33.19
KRH32876	Soybean	cytosol	33.7	32.97
KRH30192	Soybean	plastid	28.15	32.9
KRG97693	Soybean	plastid	27.78	32.75
KRH68025	Soybean	cytosol	31.48	32.2
KRG96283	Soybean	mitochondrion	30.0	31.89
KRH62918	Soybean	cytosol, plastid	30.0	31.52
KRG98239	Soybean	plastid	27.41	31.36
KRH14919	Soybean	plastid	26.67	29.75
Os02t0102000-00	Rice	cytosol	35.19	29.5
KRH72724	Soybean	plastid	29.26	28.11
KRH60067	Soybean	cytosol	34.81	27.89
KRH13399	Soybean	plastid	27.41	27.72
KRH20755	Soybean	plastid	27.78	27.68
KRH67928	Soybean	cytosol	45.93	27.07
KRH17081	Soybean	plastid	29.63	26.49
KRH34627	Soybean	cytosol	34.81	25.47
KRG95123	Soybean	plastid	38.89	24.76
KRG92161	Soybean	cytosol	34.81	24.74
KRG93517	Soybean	cytosol	39.63	24.49
KRH01158	Soybean	cytosol	41.85	24.35
KRH73271	Soybean	plastid	27.04	24.25
KRH40113	Soybean	cytosol, mitochondrion	40.37	23.8
KRH66801	Soybean	plastid	27.78	20.0

Protein Annotations

EntrezGene:100780345	Gene3D:3.40.30.10	MapMan:35.1	EMBL:ACUP02004781	EMBL:BT097402	UniProt:C6TIC1
EnsemblPlantsGene:GLYMA_08G052400	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	EnsemblPlants:KRH41800
ProteinID:KRH41800	ProteinID:KRH41800.1	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF79
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001B16AF1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:-:4057509..4058641

Molecular Weight (calculated)

29277.7 Da

IEP (calculated)

7.529

GRAVY (calculated)

-0.013

Length

270 amino acids

Sequence
(BLAST)

001: MGCVSSNLLN QDEDFSTQLG SSALGHHIVS LTSTTYGLLT LDPPSTPPSR FTLGSLFPSE PEVINSWELM SGLDTDSFRF SPLPLPKPKE NRLTPPTGSK
101: LLLTPTLADR FEKICPPNGE KRVVIYTTSL RGVRTTFEAC NAVRAALEGF GVVICERDVS MHSGFREELR TLLKGKQVMV PPRVFVKGLY IGGADEMLKV
201: AEEGLLGDLL DGLPRKKVGA VCVGCGDLRF LPCFNCNGSC KTLVKEQGRT VVVKCTHCNE NGLVLCPLCT

Best Arabidopsis Sequence Match ( AT4G10630.1 )
(BLAST)

001: MGCVSSNLLN HDEDFSQIGG GSSAFGHHIV KLTSTTYGLL TLDPPPPPSP PMTPPEKFTV DTKSKSIWSE PRVIKSEPEI INSWELMSGL DGESFRFTPL
101: PKTPVKYKVF GGENKENSDP SRRNPRKNLN DEVLKPLDLN REDSDSNSRS PRKSFKPLDL KLDEKFERIC PPGGENRVVM YTTSLRGVRQ TFEACNAVRA
201: AVESFGVVVC ERDVSMDRRF REELVSLMAK RVGDEGVAAL PPRVFVKGRY IGGGEEVLRL VEEGSFGELI SGIPRKKAGG CESGACDGCG GLFFLPCFRC
301: NGSCKMVKGW GSASVVVRCN ECNENGLVPC PICS

Arabidopsis Description

F3H7.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZSB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.