CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
vacuole 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, vacuole
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG95339
KRG97617
KRG98239
KRH02417
KRH03461
KRH17081
KRH17259
KRH20452
KRH26326
KRH27180
KRH30192
KRH31254
KRH34922
KRH43251
KRH50046
KRH50628
KRH52586
KRH52682
KRH56921
KRH59408
KRH61926
KRH62024
KRH67023
KRH72724
KRH72903

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13810.1	KRH52586	AT1G22920.1	21798944
AT5G13810.1	KRH61926	AT1G22920.1	21798944
AT5G13810.1	KRH17259	AT1G31240.1	21798944
AT5G13810.1	KRH27180	AT1G31240.1	21798944
AT5G13810.1	KRH72903	AT1G31240.1	21798944
AT5G13810.1	KRH26326	AT1G58070.1	21798944
AT5G13810.1	KRH34922	AT2G16880.1	21798944
AT5G13810.1	KRG95339	AT2G42260.1	21798944
AT5G13810.1	KRH67023	AT2G42260.1	21798944
AT5G13810.1	KRH03461	AT3G47640.1	21798944
AT5G13810.1	KRH56921	AT3G47640.1	21798944
AT5G13810.1	KRH20452	AT4G30930.1	21798944
AT5G13810.1	KRH50046	AT4G30930.1	21798944
AT5G13810.1	KRG97617	AT5G10060.1	21798944
AT5G13810.1	KRH31254	AT5G10060.1	21798944
AT5G13810.1	KRH43251	AT5G10060.1	21798944
AT5G13810.1	KRH59408	AT5G10060.1	21798944
AT5G13810.1	KRH52682	AT5G11520.1	21798944
AT5G13810.1	KRH62024	AT5G11520.1	21798944
AT5G13810.1	KRH02417	AT5G30490.1	21798944
AT5G13810.1	KRH50628	AT5G30490.1	21798944
AT5G13810.1	KRG98239	AT5G58530.1	21798944
AT5G13810.1	KRH17081	AT5G58530.1	21798944
AT5G13810.1	KRH30192	AT5G58530.1	21798944
AT5G13810.1	KRH72724	AT5G58530.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20755	Soybean	plastid	91.76	90.41
VIT_13s0019g00340.t01	Wine grape	plastid	57.68	57.46
KRH62918	Soybean	cytosol, plastid	53.93	56.03
Solyc11g005270.1.1	Tomato	cytosol	38.58	54.21
CDY67732	Canola	plastid	52.06	53.67
CDX78539	Canola	cytosol, plastid	52.06	53.05
CDY70634	Canola	plastid	52.81	52.81
Bra006216.1-P	Field mustard	plastid	52.06	52.65
AT5G13810.1	Thale cress	plastid	53.93	52.55
Bra008801.1-P	Field mustard	plastid	52.43	52.43
CDX70521	Canola	plastid	52.43	52.24
Solyc03g078380.1.1	Tomato	cytosol	48.31	49.43
PGSC0003DMT400047487	Potato	cytosol	48.31	48.86
PGSC0003DMT400015465	Potato	cytosol	45.32	44.16
KRH30192	Soybean	plastid	32.96	38.1
KRG98239	Soybean	plastid	32.96	37.29
KRH31178	Soybean	plastid	29.21	34.06
KRG97693	Soybean	plastid	28.84	33.62
KRH14919	Soybean	plastid	30.34	33.47
KRH72724	Soybean	plastid	31.09	29.54
KRG95123	Soybean	plastid	46.82	29.48
KRH17081	Soybean	plastid	31.84	28.15
KRG96283	Soybean	mitochondrion	26.59	27.95
KRH72143	Soybean	mitochondrion	27.34	27.65
KRH41800	Soybean	cytosol	27.72	27.41
KRH73271	Soybean	plastid	30.34	26.91
KRH68025	Soybean	cytosol	26.59	26.89
KRH32876	Soybean	cytosol	27.72	26.81
KRH66801	Soybean	plastid	31.09	22.13
KRG93517	Soybean	cytosol	33.33	20.37
KRH60067	Soybean	cytosol	25.09	19.88
KRH40113	Soybean	cytosol, mitochondrion	32.96	19.21
KRH01158	Soybean	cytosol	32.96	18.97
KRG92161	Soybean	cytosol	26.59	18.68
KRH34627	Soybean	cytosol	25.47	18.43
KRH67928	Soybean	cytosol	29.96	17.47

Protein Annotations

EntrezGene:100792411	Gene3D:3.40.30.10	MapMan:35.1	EMBL:ACUP02009716	EnsemblPlantsGene:GLYMA_15G236700	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	UniProt:I1MIS4	InterPro:IPR002109	EnsemblPlants:KRH13399	ProteinID:KRH13399
ProteinID:KRH13399.1	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF84	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI000233B8C7	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:44607528..44608932

Molecular Weight (calculated)

29926.5 Da

IEP (calculated)

8.622

GRAVY (calculated)

-0.608

Length

267 amino acids

Sequence
(BLAST)

001: MAELGNNNNG ANTTSSRFSF FNRSLTTLRN EPPPQKPPQL DRSLTKLVES GRGGSVVKRL CSFFESAKPS SPEKQQNPKL KPSKFIENSN SDSASKSLDS
101: PAIRLPGTED RIVLYFTSLR GIRRTYEDCY AVRMIFRGFR VWVDERDISM DANYRKELMS ALFGENNNNN NKKGHVALPQ VFIRGRHVGG ADVIKHMWEV
201: GELEKVLEGL PRTKGGFVCE SCGDVRFVPC GNCSGSRKVF DEDEEVLKRC LECNENGLIR CPNCCSS

Best Arabidopsis Sequence Match ( AT5G13810.1 )
(BLAST)

001: MAGLEKNADF SGKTTKSATT TSFFNRSLTI HGRTVVDSGP KSHNLNPSLN RTTSITKFYT PVESMGTSLK GKVKNLCRLF ETSKPVKPAL AEIPQKQKSG
101: KSLLPESRIS PFSSLNNSVI RLPGTEDRIV VYFTSLRGIR RTYEDCYAVR MIFRGFRVWI DERDVSMDIA YRKELQIAMG EKSVSLPQVF IMGKYVGGAD
201: VIKSLFEIGE LAKILKEFPM RQPGFVCHCC GDIRFVPCSN CSGSKKLFDE DEDRVKRCPE CNENGLIRCP DCSS

Arabidopsis Description

AT5g13810/MAC12_24 [Source:UniProtKB/TrEMBL;Acc:Q9FFZ0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.