CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20452	Soybean	mitochondrion	85.88	84.27
HORVU6Hr1G043720.1	Barley	cytosol	14.12	74.0
HORVU4Hr1G013230.1	Barley	cytosol	19.47	72.86
CDY23263	Canola	cytosol	45.04	70.66
VIT_00s0265g00080.t01	Wine grape	cytosol, nucleus, plastid	22.14	65.17
Solyc02g078200.2.1	Tomato	nucleus	59.16	58.71
VIT_14s0060g00010.t01	Wine grape	mitochondrion	19.47	57.3
PGSC0003DMT400076437	Potato	plastid	57.25	55.76
TraesCS1D01G396400.1	Wheat	mitochondrion	53.44	54.69
TraesCS1A01G388500.1	Wheat	mitochondrion	53.44	54.47
Zm00001d038973_P001	Maize	mitochondrion	51.91	54.4
Os05t0557800-02	Rice	mitochondrion	51.91	54.4
CDY36464	Canola	mitochondrion	52.67	54.12
EES19931	Sorghum	mitochondrion	51.15	53.6
TraesCS1B01G415900.1	Wheat	mitochondrion	52.67	53.49
Bra010267.1-P	Field mustard	mitochondrion	52.67	53.49
CDY13395	Canola	mitochondrion	52.67	52.87
CDY28228	Canola	mitochondrion	51.15	51.74
Bra024036.1-P	Field mustard	mitochondrion	52.29	51.31
Bra011233.1-P	Field mustard	mitochondrion	50.38	51.16
AT4G30930.1	Thale cress	mitochondrion	52.67	51.11
GSMUA_Achr9P06220_001	Banana	mitochondrion	50.38	49.81
CDX68704	Canola	mitochondrion	48.85	49.61
HORVU1Hr1G085550.1	Barley	plastid	52.29	42.81
KRG91805	Soybean	nucleus, plastid	25.57	31.46
KRH34980	Soybean	mitochondrion, nucleus, plastid	25.57	31.46

Protein Annotations

EntrezGene:100781947	MapMan:17.7.1.1.19	EMBL:ACUP02004653	EnsemblPlantsGene:GLYMA_07G196700	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	UniProt:I1KLJ8	EnsemblPlants:KRH50046	ProteinID:KRH50046
ProteinID:KRH50046.1	InterPro:L21-like_sf	InterPro:L21p-like	HAMAP:MF_01363	PFAM:PF00829	ScanProsite:PS01169
PANTHER:PTHR21349	InterPro:Ribosomal_L21	InterPro:Ribosomal_L21_CS	SUPFAM:SSF141091	TIGRFAMs:TIGR00061	UniParc:UPI0002338069
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:36499242..36503670

Molecular Weight (calculated)

29622.2 Da

IEP (calculated)

8.594

GRAVY (calculated)

-0.618

Length

262 amino acids

Sequence
(BLAST)

001: MASRRCLRAL TQTRPFLFRK ASSLRSLAVL PFPNSNASPH AFTARASVFA QCPHLRCFSS DKKDDHSDEE DDSDEDYDEE EDYVDDDDVT VSRGKKVYTA
101: EEKEAEAAAI GYRVVGPLQK EEDSVFKPYE PVFAVVQIGS HQFKVSNRDS IFTERLKFCE VNDKLILNKV LLLGSASQTI VGRPIVPDAA VHAVVEEHAL
201: DAKVIIFKKK RRKNYRRTKG HRQELTKLRI TDIQGIEKPQ NVLPEKPPKP AKKEKEKVAV TA

Best Arabidopsis Sequence Match ( AT4G30930.1 )
(BLAST)

001: MASLRCFREL SRRATTVFSI NQTRSISSFH GIEFSGTSIS HGTVIPNRSL TRNLPWYSHW YRSQDRCFSS NTKDTDEDEE SSEGEDDDEE EGEDFEDSAD
101: MEVEREYSPA EKVEEAEEIG YKVMGPLKPS ERLFKPYEPV FAIVQIGSHQ FKVSNGDSIF TEKLKFCDIN DKLELTKVLL LGSASQTIIG RPILPDATVH
201: AVVEEHALDE KVLIFKKKRR KNYRRTRGHR QELTKLRITD IQGIEKPEPK IVHKPSKEAV TEQTKAELVA

Arabidopsis Description

RPL21MNFD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZG0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.