CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038973_P001	Maize	mitochondrion	94.4	94.4
HORVU4Hr1G013230.1	Barley	cytosol	24.8	88.57
HORVU6Hr1G043720.1	Barley	cytosol	16.8	84.0
TraesCS1D01G396400.1	Wheat	mitochondrion	72.0	70.31
TraesCS1A01G388500.1	Wheat	mitochondrion	72.0	70.04
Os05t0557800-02	Rice	mitochondrion	70.0	70.0
TraesCS1B01G415900.1	Wheat	mitochondrion	70.8	68.6
CDY23263	Canola	cytosol	45.2	67.66
VIT_00s0265g00080.t01	Wine grape	cytosol, nucleus, plastid	20.0	56.18
HORVU1Hr1G085550.1	Barley	plastid	70.8	55.31
GSMUA_Achr9P06220_001	Banana	mitochondrion	56.8	53.58
CDY36464	Canola	mitochondrion	52.4	51.37
Bra024036.1-P	Field mustard	mitochondrion	54.8	51.31
KRH20452	Soybean	mitochondrion	54.8	51.31
CDX68704	Canola	mitochondrion	52.8	51.16
KRH50046	Soybean	mitochondrion	53.6	51.15
Solyc02g078200.2.1	Tomato	nucleus	53.6	50.76
CDY13395	Canola	mitochondrion	52.8	50.57
PGSC0003DMT400076437	Potato	plastid	54.4	50.56
Bra010267.1-P	Field mustard	mitochondrion	51.6	50.0
AT4G30930.1	Thale cress	mitochondrion	53.2	49.26
Bra011233.1-P	Field mustard	mitochondrion	50.4	48.84
CDY28228	Canola	mitochondrion	50.4	48.65
VIT_14s0060g00010.t01	Wine grape	mitochondrion	16.8	47.19
EES06613	Sorghum	plastid	26.8	32.06

Protein Annotations

MapMan:17.7.1.1.19	EntrezGene:8074578	UniProt:C5YVG2	EnsemblPlants:EES19931	ProteinID:EES19931	ProteinID:EES19931.1
GO:GO:0000003	GO:GO:0000741	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003723
GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005840	GO:GO:0006412	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009553	GO:GO:0009555	GO:GO:0009567	GO:GO:0009987
GO:GO:0010197	GO:GO:0016043	GO:GO:0019538	GO:GO:0030154	GO:GO:0043565	InterPro:L21-like_sf
InterPro:L21p-like	HAMAP:MF_01363	PFAM:PF00829	ScanProsite:PS01169	PANTHER:PTHR21349	InterPro:Ribosomal_L21
InterPro:Ribosomal_L21_CS	EnsemblPlantsGene:SORBI_3009G228300	SUPFAM:SSF141091	TIGRFAMs:TIGR00061	UniParc:UPI0001A8925C	RefSeq:XP_002441501.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:56934083..56937194

Molecular Weight (calculated)

27774.9 Da

IEP (calculated)

6.637

GRAVY (calculated)

-0.555

Length

250 amino acids

Sequence
(BLAST)

001: MASRRCLLRL LSSRLVPQRS QHLAPVSIAT RTLTSLSEPL GSPAPRALAS PRLYYPSRCH FATRSSGDED DEEDEEEHYD DEGSEGEWGD EEEAVAAKKP
101: SGKTEEEKVA EAAEIGYKVL GPLGADEKPF KPYEPVFAVV QIGSHQFKVS NGDSIFTERL KFCDVNDKLV LNRVLMLGSQ TQTVIGRPIL PDAAVHAVVE
201: EHALDAKVII FKKKRRKNYR RTKGHRQELT KLRITNIEGI DKPETAAVAA

Best Arabidopsis Sequence Match ( AT4G30930.1 )
(BLAST)

001: MASLRCFREL SRRATTVFSI NQTRSISSFH GIEFSGTSIS HGTVIPNRSL TRNLPWYSHW YRSQDRCFSS NTKDTDEDEE SSEGEDDDEE EGEDFEDSAD
101: MEVEREYSPA EKVEEAEEIG YKVMGPLKPS ERLFKPYEPV FAIVQIGSHQ FKVSNGDSIF TEKLKFCDIN DKLELTKVLL LGSASQTIIG RPILPDATVH
201: AVVEEHALDE KVLIFKKKRR KNYRRTRGHR QELTKLRITD IQGIEKPEPK IVHKPSKEAV TEQTKAELVA

Arabidopsis Description

RPL21MNFD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZG0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.